RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 C4BPBP20851 252 aa24.34■■□□□ 1.49
CTDNEP1-208ENST00000573600 S100GP29377 79 aa24.34■■□□□ 1.49
CTDNEP1-208ENST00000573600 STUMQ69YW2 141 aa24.34■■□□□ 1.49
CTDNEP1-208ENST00000573600 LRTM2Q8N967 370 aa24.34■■□□□ 1.49
CTDNEP1-208ENST00000573600 OR10V1Q8NGI7 309 aa24.34■■□□□ 1.49
CTDNEP1-208ENST00000573600 SDSLQ96GA7 329 aa24.34■■□□□ 1.49
CTDNEP1-208ENST00000573600 AGAP20933 346 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 IL2RGP31785 369 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 LUMP51884 338 aaPredicted RBP24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 FAM201AQ5SY85 155 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 C1orf87Q8N0U7 546 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 PPP1R1CQ8WVI7 109 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 CCL28Q9NRJ3 127 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 HCFC1P51610 2035 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 COL6A6A6NMZ7 2263 aa24.33■■□□□ 1.49
CTDNEP1-208ENST00000573600 TRAV14DV4A0A0A6YYC5 116 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 SIAH2O43255 324 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 PLAUP00749 431 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 GNLYP22749 145 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 LIAT1Q6ZQX7 453 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 NCOR1P1Q9H4R4 102 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 RDH8Q9NYR8 311 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 FXYD6-FXYD2A0A087WZ82 144 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 C3orf85A0A1B0GTC6 90 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 CLDN14O95500 239 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 IFNA21P01568 189 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 HOXB5P09067 269 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 MST1LQ2TV78 715 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 ZNF672Q499Z4 452 aaPredicted RBP24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 ZCCHC24Q8N2G6 241 aaKnown RBP24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 MRGPRDQ8TDS7 321 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 C2orf50Q96LR7 162 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 TMEM204Q9BSN7 226 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 TOLLIPQ9H0E2 274 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 ZNF665Q9H7R5 613 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 MAB21L2Q9Y586 359 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 PKD1L2Q7Z442 2459 aa24.32■■□□□ 1.48
CTDNEP1-208ENST00000573600 CACNA1DQ01668 2161 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 DEFB108AA8MXU0 73 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 HSD17B6O14756 317 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 HBZP02008 142 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 SLC25A4P12235 298 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 CEACAM6P40199 344 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 SRPXP78539 464 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 EDDM3AQ14507 147 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 TBC1D26Q86UD7 250 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 LGI3Q8N145 548 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 BVESQ8NE79 360 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 OR13A1Q8NGR1 328 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 OR1L1Q8NH94 360 aa24.31■■□□□ 1.48
CTDNEP1-208ENST00000573600 L7N2F9 121 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 PHF1O43189 567 aaPredicted RBP24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 GZMHP20718 246 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 SP6Q3SY56 376 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 C11orf87Q6NUJ2 197 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 TPRX1Q8N7U7 411 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 ZNRF1Q8ND25 227 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 GLYATL2Q8WU03 294 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 FAM234AQ9H0X4 552 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 FBXO9Q9UK97 447 aaPredicted RBP24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 ODAMA1E959 279 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 LOXP28300 417 aaPredicted RBP24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 UQCRFS1P47985 274 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 TMEM65Q6PI78 240 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 UBALD1Q8TB05 177 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 MSI2Q96DH6 328 aaKnown RBP24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 AKR1E2Q96JD6 320 aa24.3■■□□□ 1.48
CTDNEP1-208ENST00000573600 ARPC5O15511 151 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 SPINT2O43291 252 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 P2RX3P56373 397 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 SWI5Q1ZZU3 235 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 CR1LQ2VPA4 569 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 ZNF788Q6ZQV5 615 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 THAP6Q8TBB0 222 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 NINJ1Q92982 152 aa24.29■■□□□ 1.48
CTDNEP1-208ENST00000573600 TRAV38-1A0A0B4J264 116 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 CXCL2P19875 107 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 PSMB6P28072 239 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 LRRC37A5PQ49AS3 106 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 KIAA2026Q5HYC2 2103 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 MUC15Q8N387 334 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 ARL11Q969Q4 196 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 OR10C1Q96KK4 312 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 GAFA1Q96PS6 74 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 TMEM222Q9H0R3 208 aa24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 RBM7Q9Y580 266 aaKnown RBP24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 DIDO1Q9BTC0 2240 aaKnown RBP24.28■■□□□ 1.48
CTDNEP1-208ENST00000573600 ITPR1Q14643 2758 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 LGALS8O00214 317 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 B3GALNT1O75752 331 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 MPC2O95563 127 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 RPA2P15927 270 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 DEFB108BQ8NET1 73 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 C18orf12Q96KH6 178 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 TP53RKQ96S44 253 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 TMEM178BH3BS89 294 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 TSC22D2O75157 780 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 SSTR2P30874 369 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 HTD2P86397 168 aa24.27■■□□□ 1.48
CTDNEP1-208ENST00000573600 GGNBP1Q5YKI7 109 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms