RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 LMO1P25800 156 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 SAA4P35542 130 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 IER3P46695 156 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 MADCAM1Q13477 382 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 PYDC2Q56P42 97 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 SNX22Q96L94 193 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 CCDC32Q9BV29 185 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 PECRQ9BY49 303 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 HEXA-AS1Q9H8Q6 139 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 UNKLQ9H9P5 680 aaKnown RBP11.82□□□□□ -0.52
COMMD4-225ENST00000569245 PLEKHJ1Q9NW61 149 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 KCNK7Q9Y2U2 307 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 TRAV24A0A0B4J272 114 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 TMEM82A0PJX8 343 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 MEX3AA1L020 520 aaKnown RBP11.81□□□□□ -0.52
COMMD4-225ENST00000569245 GABARAPH6UMI1 98 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 SULT1C2O00338 296 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF737O75373 536 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 OR2H2O95918 312 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 GNB3P16520 340 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 COX7A1P24310 79 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 PRSS3P35030 304 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 SCN1BQ07699 218 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF273Q14593 569 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 GRK1Q15835 563 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 NKAPLQ5M9Q1 402 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 ATAD3CQ5T2N8 411 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 HACD4Q5VWC8 232 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 C6orf201Q7Z4U5 140 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 LDLRAD3Q86YD5 345 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 SNX29P2Q8IUI4 249 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 OR8H2Q8N162 312 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 Q8N402 240 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 SMIM4Q8WVI0 70 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 BORCS5Q969J3 196 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 CHST6Q9GZX3 395 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF581Q9P0T4 197 aa11.81□□□□□ -0.52
COMMD4-225ENST00000569245 TMEM235A6NFC5 223 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 J3QRK9 145 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 SIRPB1O00241 398 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 SLC33A1O00400 549 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-225ENST00000569245 PTHLHP12272 177 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF44P15621 663 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 LGALS4P56470 323 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 ERVFRD-1P60508 538 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF782Q6ZMW2 699 aaPredicted RBP11.8□□□□□ -0.52
COMMD4-225ENST00000569245 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 SUMF2Q8NBJ7 301 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 PPP1R35Q8TAP8 253 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 GPX8Q8TED1 209 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 DYRK2Q92630 601 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 SULT4A1Q9BR01 284 aa11.8□□□□□ -0.52
COMMD4-225ENST00000569245 RBMX2Q9Y388 322 aaKnown RBP11.8□□□□□ -0.52
COMMD4-225ENST00000569245 hADV38S2A0JD32 116 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 MCRIP1C9JLW8 97 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 GPR137BO60478 399 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF728P0DKX0 622 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 MDKP21741 143 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-225ENST00000569245 RAG2P55895 527 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 DGCR2P98153 550 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 MEF2CQ06413 473 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-225ENST00000569245 RBM39Q14498 530 aaKnown RBP11.79□□□□□ -0.52
COMMD4-225ENST00000569245 BAK1Q16611 211 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 MIDNQ504T8 468 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 OLFML2AQ68BL7 652 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 HCP5Q6MZN7 132 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 C17orf107Q6ZR85 190 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 TPRX1Q8N7U7 411 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 OR52I2Q8NH67 350 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 FCAMRQ8WWV6 532 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-225ENST00000569245 FAAP24Q9BTP7 215 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF747Q9BV97 191 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 DPCDQ9BVM2 203 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-225ENST00000569245 BEX1Q9HBH7 125 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 PALMDQ9NP74 551 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 C1RLQ9NZP8 487 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 ZNRD1Q9P1U0 126 aa11.79□□□□□ -0.52
COMMD4-225ENST00000569245 ELF5Q9UKW6 265 aaPredicted RBP11.79□□□□□ -0.52
COMMD4-225ENST00000569245 POM121CA8CG34 1229 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 MGST3O14880 152 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 PSPNO60542 156 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 UPK1BO75841 260 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 LPLP06858 475 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 KCNJ3P48549 501 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 GNG2P59768 71 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 SSBP1Q04837 148 aaKnown RBP11.78□□□□□ -0.52
COMMD4-225ENST00000569245 PAN3Q58A45 887 aaKnown RBP11.78□□□□□ -0.52
COMMD4-225ENST00000569245 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 TRAPPC6BQ86SZ2 158 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 OR4S1Q8NGB4 309 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 TRIM63Q969Q1 353 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 CYYR1Q96J86 154 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 ZNF714Q96N38 554 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 MTFP1Q9UDX5 166 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 AK3Q9UIJ7 227 aa11.78□□□□□ -0.52
COMMD4-225ENST00000569245 C17orf98A8MV24 154 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms