RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 FOLR2P14207 255 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
USB1-212ENST00000566082 FOXO1Q12778 655 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 CYB5R2Q6BCY4 276 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 LHFPL1Q86WI0 220 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 KCNE4Q8WWG9 221 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 GALNT14Q96FL9 552 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 OR2H1Q9GZK4 316 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 TMEM38BQ9NVV0 291 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 FBLN5Q9UBX5 448 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 COL4A6Q14031 1691 aa9.11□□□□□ -0.95
USB1-212ENST00000566082 C11orf94C9JXX5 98 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 AQP7O14520 342 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 PMCHP20382 165 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 FAM3BP58499 235 aaPredicted RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 PSG4Q00888 419 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 EIF3IQ13347 325 aaKnown RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 OR8G1Q15617 311 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 OR8B8Q15620 311 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 ZNF818PQ6ZRF7 136 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 NUFIP2Q7Z417 695 aaKnown RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 GCNT2Q8N0V5 402 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 AP1S3Q96PC3 154 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 PLXNA2O75051 1894 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 DIDO1Q9BTC0 2240 aaKnown RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 NPIPB13A6NJU9 1138 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 NPIPB4C9JG80 1138 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BKO60814 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BJP06899 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BOP23527 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BBP33778 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BDP58876 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 TPPP2P59282 170 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BCP62807 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 SLC10A1Q14973 349 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST2H2BEQ16778 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 REC114Q7Z4M0 266 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 SELENOHQ8IZQ5 122 aaKnown RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 IFI44Q8TCB0 444 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BHQ93079 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 GALMQ96C23 342 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 CIB3Q96Q77 187 aaPredicted RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BNQ99877 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 HIST1H2BMQ99879 126 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 CFHR5Q9BXR6 569 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 DUSP13Q9UII6 198 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 OR2W1Q9Y3N9 320 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 DEFB108AA8MXU0 73 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 SPINT2O43291 252 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 NGFP01138 241 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 SRFP11831 508 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 TGIF2LXQ8IUE1 241 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 OR1P1Q8NH06 330 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 RBKSQ9H477 322 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 ZNF576Q9H609 170 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 TMEM9BQ9NQ34 198 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 FSCN3Q9NQT6 498 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.1□□□□□ -0.95
USB1-212ENST00000566082 PAM16Q9Y3D7 125 aa9.1□□□□□ -0.95
USB1-212ENST00000566082 C5orf63A6NC05 138 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 KIAA1324LA8MWY0 1029 aaPredicted RBP9.09□□□□□ -0.95
USB1-212ENST00000566082 ERVFC1-1P60608 527 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 DCAF12Q5T6F0 453 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 VHLLQ6RSH7 139 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 GPR146Q96CH1 333 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 MRPL13Q9BYD1 178 aaKnown RBP9.09□□□□□ -0.95
USB1-212ENST00000566082 OR2D2Q9H210 308 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 B3GAT1Q9P2W7 334 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 A0A1B0GU03 582 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 PRR19A6NJB7 356 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 SHISA7A6NL88 538 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 OR7C2O60412 319 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 IGHV3-13P01766 116 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 IGHV3-7P01780 117 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 GYPAP02724 150 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 CXCL1P09341 107 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 COL19A1Q14993 1142 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 TBC1D28Q2M2D7 210 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 CMTM2Q8TAZ6 248 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 ZNF837Q96EG3 531 aaPredicted RBP9.09□□□□□ -0.95
USB1-212ENST00000566082 TM2D1Q9BX74 207 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 OCIAD1Q9NX40 245 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 IGHV3-43A0A0B4J1X8 118 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 RRP8O43159 456 aaKnown RBP9.09□□□□□ -0.95
USB1-212ENST00000566082 ACTL6BO94805 426 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 IGHV3-43DP0DP04 118 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 OR3A1P47881 315 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 MNX1P50219 401 aaPredicted RBP9.09□□□□□ -0.95
USB1-212ENST00000566082 TRIM61Q5EBN2 209 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 CARFQ8N187 725 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 MUCL1Q96DR8 90 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 OR4C12Q96R67 309 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 TMEM204Q9BSN7 226 aa9.09□□□□□ -0.95
USB1-212ENST00000566082 CLN8Q9UBY8 286 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms