RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FIP1L1Q6UN15 594 aaKnown RBP7.92□□□□□ -1.14
LINC00838-201ENST00000562956 ZNF546Q86UE3 836 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 SFT2D1Q8WV19 159 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 KIRREL1Q96J84 757 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 OR2V2Q96R30 315 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 NAA60Q9H7X0 242 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 COMMD9Q9P000 198 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 TAAR3PQ9P1P4 343 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 MEMO1Q9Y316 297 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 ADGRG4Q8IZF6 3080 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
LINC00838-201ENST00000562956 ZGRF1Q86YA3 2104 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 DPRXA6NFQ7 191 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 TUSC2O75896 110 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 DIRAS3O95661 229 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 NFYBP25208 207 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 LMO1P25800 156 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 LUMP51884 338 aaPredicted RBP7.92□□□□□ -1.14
LINC00838-201ENST00000562956 MZT1Q08AG7 82 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 TMEM108Q6UXF1 575 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 FAM219AQ8IW50 185 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 GAPTQ8N292 157 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 OR4A4PQ8NGN8 299 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 LRRC29Q8WV35 223 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 SECTM1Q8WVN6 248 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 NMES1Q9C002 83 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 GSN-AS1Q9NRJ2 163 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 METRNQ9UJH8 293 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 TRAPPC2LQ9UL33 140 aa7.92□□□□□ -1.14
LINC00838-201ENST00000562956 NCOR2Q9Y618 2525 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 CRYBA1P05813 215 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 CTXN2P0C2S0 81 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 SLC25A4P12235 298 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 RPA2P15927 270 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 EGR1P18146 543 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 RPS23P62266 143 aaKnown RBP7.91□□□□□ -1.14
LINC00838-201ENST00000562956 TMEM187Q14656 261 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 PRR18Q8N4B5 295 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 UBALD1Q8TB05 177 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 THAP6Q8TBB0 222 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 IL1F10Q8WWZ1 152 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 GALNT14Q96FL9 552 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 OR1A1Q9P1Q5 309 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 NDRG3Q9UGV2 375 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 RELNP78509 3460 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 TRBV6-7A0A0A0MS04 114 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 PTAFRP25105 342 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 PSMB6P28072 239 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 ID4P47928 161 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 BSPH1Q075Z2 132 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 SMIM21Q3B7S5 101 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 ZNF818PQ6ZRF7 136 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 NUP37Q8NFH4 326 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 OR10J5Q8NHC4 309 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 WFIKKN1Q96NZ8 548 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 GPHA2Q96T91 129 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 CABLES2Q9BTV7 478 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 MED9Q9NWA0 146 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 PCDHB10Q9UN67 800 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 TNFSF18Q9UNG2 199 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 KCNIP3Q9Y2W7 256 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 CADP27708 2225 aa7.91□□□□□ -1.14
LINC00838-201ENST00000562956 SHANK1Q9Y566 2161 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.9□□□□□ -1.14
LINC00838-201ENST00000562956 H7C1Q1 480 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 TXNL1O43396 289 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 SNAPC5O75971 98 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 SRSF3P84103 164 aaKnown RBP7.9□□□□□ -1.14
LINC00838-201ENST00000562956 MOB1BQ7L9L4 216 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 MOGAT3Q86VF5 341 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 CD177Q8N6Q3 437 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 OR1S2Q8NGQ3 325 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 PRR7Q8TB68 274 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 GLYATL2Q8WU03 294 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 ITLN1Q8WWA0 313 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 MRPL24Q96A35 216 aaKnown RBP7.9□□□□□ -1.14
LINC00838-201ENST00000562956 ZNF471Q9BX82 626 aaPredicted RBP7.9□□□□□ -1.14
LINC00838-201ENST00000562956 MBNL3Q9NUK0 354 aaKnown RBP7.9□□□□□ -1.14
LINC00838-201ENST00000562956 MBD2Q9UBB5 411 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 WIPI2Q9Y4P8 454 aa7.9□□□□□ -1.14
LINC00838-201ENST00000562956 MPPED1O15442 326 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 AKR1C3P42330 323 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 CA7P43166 264 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 BLOC1S1P78537 153 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 S100A12P80511 92 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 CYCSP99999 105 aaKnown RBP7.9□□□□□ -1.15
LINC00838-201ENST00000562956 COL10A1Q03692 680 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 AESQ08117 197 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 SNTB1Q13884 538 aaKnown RBP7.9□□□□□ -1.15
LINC00838-201ENST00000562956 H1FOOQ8IZA3 346 aaPredicted RBP7.9□□□□□ -1.15
LINC00838-201ENST00000562956 C2orf50Q96LR7 162 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 TP53RKQ96S44 253 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 RNF126Q9BV68 326 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 SLC5A7Q9GZV3 580 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 CCL28Q9NRJ3 127 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 GSKIPQ9P0R6 139 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 CHD8Q9HCK8 2581 aa7.9□□□□□ -1.15
LINC00838-201ENST00000562956 RNF222A6NCQ9 220 aa7.89□□□□□ -1.15
LINC00838-201ENST00000562956 SRRM5B3KS81 715 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms