RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GLIPR1L1Q6UWM5 242 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 OR2W3Q7Z3T1 314 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 TGIF2LXQ8IUE1 241 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 STPG2Q8N412 459 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 COMMD1Q8N668 190 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 NKAIN3Q8N8D7 197 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 LINC00482Q8N8I6 264 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 RTN4IP1Q8WWV3 396 aaPredicted RBP11.2□□□□□ -0.62
SNX6-210ENST00000557341 THRSPQ92748 146 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 DPF1Q92782 380 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 EAF1Q96JC9 268 aaPredicted RBP11.2□□□□□ -0.62
SNX6-210ENST00000557341 ETAA1Q9NY74 926 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 CNOT2Q9NZN8 540 aaKnown RBP11.2□□□□□ -0.62
SNX6-210ENST00000557341 TRAPPC2LQ9UL33 140 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 FAM90A10PA6NDY2 464 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 FAM90A7PA6NKC0 464 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 NCBP2LA6PVI3 153 aaKnown RBP11.19□□□□□ -0.62
SNX6-210ENST00000557341 NUDT19A8MXV4 375 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 FAM90A23PA8MXZ1 464 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 C12orf77C9JDV5 145 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 SPINT2O43291 252 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 MAS1P04201 325 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 THBS3P49746 956 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 WNT4P56705 351 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 DOC2BQ14184 412 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 SYT6Q5T7P8 510 aaPredicted RBP11.19□□□□□ -0.62
SNX6-210ENST00000557341 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 ETV3LQ6ZN32 361 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 CDH26Q8IXH8 852 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 C8orf59Q8N0T1 100 aaPredicted RBP11.19□□□□□ -0.62
SNX6-210ENST00000557341 Q8N6K4 173 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 TMEM104Q8NE00 496 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 KLHL30-AS1Q8NEE0 82 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 GGHQ92820 318 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 ST6GALNAC6Q969X2 333 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 DERL3Q96Q80 235 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 ZFP57Q9NU63 452 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 LIN7CQ9NUP9 197 aaKnown RBP11.19□□□□□ -0.62
SNX6-210ENST00000557341 GNG12Q9UBI6 72 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 LINC00527Q9UJ94 153 aa11.19□□□□□ -0.62
SNX6-210ENST00000557341 A0A1W2PPK0 400 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 AP4M1O00189 453 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 CA11O75493 328 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 MGMTP16455 207 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 MAPK3P27361 379 aaPredicted RBP11.18□□□□□ -0.62
SNX6-210ENST00000557341 CD1BP29016 333 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 CAPGP40121 348 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 ZNF137PP52743 207 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 RCN1Q15293 331 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 FAM53AQ6NSI3 398 aaPredicted RBP11.18□□□□□ -0.62
SNX6-210ENST00000557341 SLC25A48Q6ZT89 311 aaKnown RBP11.18□□□□□ -0.62
SNX6-210ENST00000557341 C8orf86Q6ZUL3 223 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 AHSA2Q719I0 299 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 MRPL41Q8IXM3 137 aaKnown RBP11.18□□□□□ -0.62
SNX6-210ENST00000557341 PRR18Q8N4B5 295 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 OR4K15Q8NH41 348 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 SELENOIQ9C0D9 397 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 ABCG5Q9H222 651 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 BANF2Q9H503 90 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 PEX16Q9Y5Y5 336 aa11.18□□□□□ -0.62
SNX6-210ENST00000557341 K7EIL1 84 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 SLC31A2O15432 143 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 CRTAPO75718 401 aaPredicted RBP11.17□□□□□ -0.62
SNX6-210ENST00000557341 SC5DO75845 299 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 MOSP00540 346 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 HBZP02008 142 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 CD1AP06126 327 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 GNAO1P09471 354 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 CELP19835 753 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 GPR12P47775 334 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 EGFEM1PQ0D2K5 195 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 TEX38Q6PEX7 206 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 GAPTQ8N292 157 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 Q8N9W7 124 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 ZNF439Q8NDP4 499 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 OR8H1Q8NGG4 311 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 OR10V1Q8NGI7 309 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 Q96M66 194 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 UQCC2Q9BRT2 126 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 MCRIP2Q9BUT9 160 aaKnown RBP11.17□□□□□ -0.62
SNX6-210ENST00000557341 GON7Q9BXV9 100 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 PSORS1C1Q9UIG5 152 aa11.17□□□□□ -0.62
SNX6-210ENST00000557341 RRP9O43818 475 aaKnown RBP11.16□□□□□ -0.62
SNX6-210ENST00000557341 GLAP06280 429 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 RCC1P18754 421 aaPredicted RBP11.16□□□□□ -0.62
SNX6-210ENST00000557341 HOXD3P31249 432 aaPredicted RBP11.16□□□□□ -0.62
SNX6-210ENST00000557341 MYCNOSP40205 109 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 GPR50Q13585 617 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 LYPD6Q86Y78 171 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 ZNF695Q8IW36 515 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 TFAP2CQ92754 450 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 RASL11BQ9BPW5 248 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 CST11Q9H112 138 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 PLCXD1Q9NUJ7 323 aa11.16□□□□□ -0.62
SNX6-210ENST00000557341 PDCD6O75340 191 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 FUT3P21217 361 aa11.15□□□□□ -0.62
SNX6-210ENST00000557341 KRTAP10-11P60412 298 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms