RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 PLCE1Q9P212 2302 aa1.84□□□□□ -2.12
SCFD1-219ENST00000556413 VWFP04275 2813 aa1.84□□□□□ -2.12
SCFD1-219ENST00000556413 YLPM1P49750 1951 aaKnown RBP1.83□□□□□ -2.12
SCFD1-219ENST00000556413 HUWE1Q7Z6Z7 4374 aaKnown RBP1.83□□□□□ -2.12
SCFD1-219ENST00000556413 PKD1L1Q8TDX9 2849 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 IGLV4-60A0A075B6I1 120 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 IGLV3-9A0A075B6K5 115 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 CENPVL3A0A0U1RRI6 287 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF816-ZNF321PA0A0X1KG74 233 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 CLPSL1A2RUU4 121 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 RPL36A-HNRNPH2H7BZ11 118 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 J3QLI3 93 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 K7EIL1 84 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 DLGAP1O14490 977 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 OR7A10O76100 309 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 MFN2O95140 757 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 KRT75O95678 551 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 IGKV1-17P01599 117 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 GYPAP02724 150 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 IL6P05231 212 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 CRYBA1P05813 215 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 FGF4P08620 206 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 IFI6P09912 130 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 CD28P10747 220 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 SLC2A1P11166 492 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 PSKH1P11801 424 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF250P15622 560 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 COX7A1P24310 79 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 STOMP27105 288 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 CFHR2P36980 270 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 RPS27P42677 84 aaKnown RBP1.83□□□□□ -2.12
SCFD1-219ENST00000556413 GPR4P46093 362 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 OR1E2P47887 323 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 APOC4P55056 127 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM33P57088 247 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ARF6P62330 175 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 PSG4Q00888 419 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 PAX5Q02548 391 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 STX3Q13277 289 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 SCGB2A2Q13296 93 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 EXOSC2Q13868 293 aaKnown RBP1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ENDOGQ14249 297 aaKnown RBP1.83□□□□□ -2.12
SCFD1-219ENST00000556413 GNA13Q14344 377 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 RGNQ15493 299 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 OR8B8Q15620 311 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 DUSP7Q16829 419 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ANXA8L1Q5VT79 327 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ARL9Q6T311 187 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 C10orf99Q6UWK7 81 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 VMO1Q7Z5L0 202 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 LCA5Q86VQ0 697 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 SNX32Q86XE0 403 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 IFT20Q8IY31 132 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM61Q8N0U2 210 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 MREGQ8N565 214 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 FAM216BQ8N7L0 139 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 OR8J2Q8NGG1 315 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 OR5J2Q8NH18 312 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 OR51A7Q8NH64 312 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 OR2AE1Q8NHA4 323 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 C11orf40Q8WZ69 217 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 POP5Q969H6 163 aaKnown RBP1.83□□□□□ -2.12
SCFD1-219ENST00000556413 TESCQ96BS2 214 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 UPRTQ96BW1 309 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 TAMM41Q96BW9 452 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 RASD2Q96D21 266 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 SLC41A3Q96GZ6 507 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 NSMCE2Q96MF7 247 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ZBTB18Q99592 522 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 ZNF385DQ9H6B1 395 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM231Q9H6L2 316 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 BEX1Q9HBH7 125 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM165Q9HC07 324 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 POLE3Q9NRF9 147 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 MRPL39Q9NYK5 338 aaKnown RBP1.83□□□□□ -2.12
SCFD1-219ENST00000556413 TAS2R5Q9NYW4 299 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 VAPAQ9P0L0 249 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 POLR1DQ9Y2S0 133 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 STARD10Q9Y365 291 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 V9GYQ6 96 aa1.83□□□□□ -2.12
SCFD1-219ENST00000556413 IGHV1-69DA0A0B4J2H0 117 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TMEM120BA0PK00 339 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 TVP23AA6NH52 213 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 FAM74A7A6NL05 159 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 LRRC30A6NM36 301 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 H3BSH0 61 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 H3BUX3 64 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 FAAHO00519 579 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 UBDO15205 165 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 RER1O15258 196 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 RGS16O15492 202 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CHST1O43916 411 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 DIRAS1O95057 198 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 VAMP5O95183 116 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 FARS2O95363 451 aaKnown RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 IGHV1-69P01742 117 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 IFI30P13284 250 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CTLA4P16410 223 aa1.82□□□□□ -2.12
SCFD1-219ENST00000556413 CEBPDP49716 269 aaPredicted RBP1.82□□□□□ -2.12
SCFD1-219ENST00000556413 RPL14P50914 215 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms