RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 FGF7P21781 194 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF266Q14584 549 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 SLC38A6Q8IZM9 456 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 OR2C3Q8N628 320 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 PATZ1Q9HBE1 687 aaKnown RBP9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 MED9Q9NWA0 146 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 RAB5BP61020 215 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 SLC17A5Q9NRA2 495 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 MTCH1Q9NZJ7 389 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 JTBO76095 146 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 CLDN14O95500 239 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 SLC25A28Q96A46 364 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 IGKV3-7A0A075B6H7 116 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 NCBP2LA6PVI3 153 aaKnown RBP9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 NTN3O00634 580 aaPredicted RBP9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 ERVFRD-1P60508 538 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 ASPHD2Q6ICH7 369 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 STPG2Q8N412 459 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 OR10P1Q8NGE3 313 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 MARS2Q96GW9 593 aaKnown RBP9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 MYO9AB2RTY4 2548 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 C1orf87Q8N0U7 546 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 SPICQ8N5J4 248 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 RBMXL3Q8N7X1 1067 aaKnown RBP9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 GNB4Q9HAV0 340 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 REV3LO60673 3130 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 CYTIPO60759 359 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 ACTL6AO96019 429 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 DTYMKP23919 212 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 LGALS4P56470 323 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 LY6DQ14210 128 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 BMPERQ8N8U9 685 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 AQP3Q92482 292 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 TP53RKQ96S44 253 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 NGBQ9NPG2 151 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 IGHV3OR16-10A0A075B7F0 116 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 NKX6-3A6NJ46 265 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 KRBOX1C9JBD0 128 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 H3BUI4 141 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 TNFSF10P50591 281 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 RPL11P62913 178 aaKnown RBP9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 GAMTQ14353 236 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 MGAQ8IWI9 3026 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 IGHV3-35A0A0C4DH35 117 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 IGKV1-12A0A0C4DH73 117 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 KIAA1324LA8MWY0 1029 aaPredicted RBP9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 SYNGR3O43761 229 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 GFRA3O60609 400 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 IGKV1D-12P01611 117 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF818PQ6ZRF7 136 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 FADS6Q8N9I5 356 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 GTF3AQ92664 365 aaKnown RBP9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 SAP30LQ9HAJ7 183 aa9.24□□□□□ -0.93
TGFBR1-209ENST00000552516 PLAUP00749 431 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF17P17021 662 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 PAX6P26367 422 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 LHX2P50458 406 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 BIVMQ86UB2 503 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 TRGV10A0A0A0MS01 117 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 TMEM14DPA8MWL7 114 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 TRDCB7Z8K6 153 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 IFNA1P01562 189 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 CRYABP02511 175 aaKnown RBP9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 ISG15P05161 165 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 RTP5Q14D33 572 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 GUCA2BQ16661 112 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 ACSF3Q4G176 576 aaPredicted RBP9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 C1orf100Q5SVJ3 147 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF660Q6AZW8 331 aaPredicted RBP9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 TMEM108Q6UXF1 575 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 DDA1Q9BW61 102 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 DLL3Q9NYJ7 618 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 RNASEK-C17orf49H0YIS7 233 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 BATFQ16520 125 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 PIK3IP1Q96FE7 263 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 SHARPINQ9H0F6 387 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 PARD6AQ9NPB6 346 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 NDRG3Q9UGV2 375 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 MAP1AP78559 2803 aaPredicted RBP9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 IGKV1-27A0A075B6S5 117 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 LY6HO94772 140 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 IGHV1-2P23083 117 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 CLDN18P56856 261 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 CEACAM21Q3KPI0 293 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 GGNQ86UU5 652 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 GMPPAQ96IJ6 420 aaPredicted RBP9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 S4R3C0 116 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 H7C1Q1 480 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 CLLU1Q5K131 121 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 PRSS54Q6PEW0 395 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 NIPSNAP3BQ9BS92 247 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 RAB18Q9NP72 206 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 ZFP57Q9NU63 452 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 GPR132Q9UNW8 380 aa9.23□□□□□ -0.93
TGFBR1-209ENST00000552516 STRAPQ9Y3F4 350 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms