RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 LYPD6BQ8NI32 183 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 TMBIM1Q969X1 311 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 ANKRD9Q96BM1 317 aaPredicted RBP4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 PPWD1Q96BP3 646 aaKnown RBP4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 RNF170Q96K19 258 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 JSRP1Q96MG2 331 aaPredicted RBP4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 RNF145Q96MT1 663 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 PFDN5Q99471 154 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 DCUN1D5Q9BTE7 237 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 YTHDF1Q9BYJ9 559 aaKnown RBP4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 MED9Q9NWA0 146 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 MCUBQ9NWR8 336 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 ZNF629Q9UEG4 869 aaPredicted RBP4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 FBXO5Q9UKT4 447 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 MED12LQ86YW9 2145 aa4.6□□□□□ -1.67
TGFBR1-208ENST00000550253 MED12Q93074 2177 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 IGHV7-81A0A0B4J1V7 117 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 A6NIZ1 184 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 DEFB108AA8MXU0 73 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 EEF1E1-BLOC1S5C9J1V9 151 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 SULT1C2O00338 296 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 EEF1E1O43324 174 aaKnown RBP4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 ERI3O43414 337 aaKnown RBP4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 IGKV3-11P04433 115 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 ACSM4P0C7M7 580 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 SLC2A5P22732 501 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 LOXP28300 417 aaPredicted RBP4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 CEACAM6P40199 344 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 CDKN2CP42773 168 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 MAGEA3P43357 314 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 MAGEA6P43360 314 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 RGS6P49758 472 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 UGT2B15P54855 530 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 OR2B6P58173 313 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 DEFA1P59665 94 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 DEFA3P59666 94 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 PRPS1P60891 318 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 RAP1BP61224 184 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 MS4A2Q01362 244 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 ZNF763Q0D2J5 394 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 BTN1A1Q13410 526 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 PABPC1L2AQ5JQF8 200 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 CLLU1Q5K131 121 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 GALNT10Q86SR1 603 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 ZNF546Q86UE3 836 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 APRG1Q8IVJ8 170 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 TCTE3Q8IZS6 198 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 JAGN1Q8N5M9 183 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 PACRGLQ8N7B6 248 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 MAPK1IP1LQ8NDC0 245 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 MORN4Q8NDC4 146 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 C19orf18Q8NEA5 215 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 SLC7A13Q8TCU3 470 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 C10orf82Q8WW14 230 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 S100PBPQ96BU1 408 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 HIST1H4GQ99525 98 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 C19orf24Q9BVV8 132 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 OSBPL11Q9BXB4 747 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 UGT2B28Q9BY64 529 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 ACTR3CQ9C0K3 210 aaPredicted RBP4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 NANOGQ9H9S0 305 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 CXorf21Q9HAI6 301 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 NIT2Q9NQR4 276 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 COPZ2Q9P299 210 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 KLHL21Q9UJP4 597 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 POLR3HQ9Y535 204 aaPredicted RBP4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 ALG5Q9Y673 324 aa4.59□□□□□ -1.67
TGFBR1-208ENST00000550253 IGLV8-61A0A075B6I0 122 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 G3V2T6 193 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 CTNSO60931 367 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 CRLF1O75462 422 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 EEDO75530 441 aaKnown RBP4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 HLA-HP01893 362 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 C1QAP02745 245 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 HPNP05981 417 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 GDF1P27539 372 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 NTSP30990 170 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 IGLV3-21P80748 117 aaPredicted RBP4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 TSPAN31Q12999 210 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 GRK1Q15835 563 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 HACD4Q5VWC8 232 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 OLFML2AQ68BL7 652 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 CGB2Q6NT52 195 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 OPN5Q6U736 354 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 RNF175Q8N4F7 328 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 CCDC71LQ8N9Z2 235 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 SFT2D1Q8WV19 159 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 C22orf15Q8WYQ4 148 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 UCN3Q969E3 161 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 VSIG2Q96IQ7 327 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 CNBD2Q96M20 576 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 KCTD14Q9BQ13 255 aaPredicted RBP4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 TMED9Q9BVK6 235 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 POTEKPQ9BYX7 375 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 RETNQ9HD89 108 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 KCNIP1Q9NZI2 227 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 CLEC2DQ9UHP7 191 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 FLVCR1Q9Y5Y0 555 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 CDH10Q9Y6N8 788 aa4.58□□□□□ -1.68
TGFBR1-208ENST00000550253 DSCAMO60469 2012 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms