RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MUL1Q969V5 352 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 VCXQ9H320 206 aa12.85□□□□□ -0.35
DDX55-212ENST00000544738 DNAH1Q9P2D7 4330 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 PNMA8CA0A1B0GUJ8 204 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 A0A1W2PP11 408 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 A0A1W2PPK0 400 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 MAGEA13PA6NCF6 341 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 SH2D7A6NKC9 451 aaPredicted RBP12.84□□□□□ -0.35
DDX55-212ENST00000544738 C15orf65H3BRN8 121 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 CCRL2O00421 344 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 HSD17B6O14756 317 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 CASQ2O14958 399 aaPredicted RBP12.84□□□□□ -0.35
DDX55-212ENST00000544738 CA11O75493 328 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 MAS1P04201 325 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 GNAO1P09471 354 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 IL3RAP26951 378 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 DIAPH2-AS1Q14236 149 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 TMEM30BQ3MIR4 351 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 AWAT2Q6E213 333 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 AHSA2Q719I0 299 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 NKAIN3Q8N8D7 197 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 BPIFB6Q8NFQ5 453 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 CHPT1Q8WUD6 406 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 FBLIM1Q8WUP2 373 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 DERL3Q96Q80 235 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 GFOD1Q9NXC2 390 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 RCC2Q9P258 522 aaKnown RBP12.84□□□□□ -0.35
DDX55-212ENST00000544738 TRAPPC2LQ9UL33 140 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 ERGIC3Q9Y282 383 aa12.84□□□□□ -0.35
DDX55-212ENST00000544738 IGHV1-3A0A0C4DH29 117 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 A0A1W2PPE3 182 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 PSMB11A5LHX3 300 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 SPINT2O43291 252 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 DUS4LO95620 317 aaKnown RBP12.83□□□□□ -0.36
DDX55-212ENST00000544738 IGKV1D-33P01593 117 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 IGKV1-33P01594 117 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 GLAP06280 429 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 EBI3Q14213 229 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 HNF4GQ14541 408 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 C6orf183Q5T699 404 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 RAB12Q6IQ22 244 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 LAIR2Q6ISS4 152 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 TRAT1Q6PIZ9 186 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 MOB3BQ86TA1 216 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 NANOGP1Q8N7R0 232 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 DPF1Q92782 380 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 UQCC2Q9BRT2 126 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 ETAA1Q9NY74 926 aa12.83□□□□□ -0.36
DDX55-212ENST00000544738 MGMTP16455 207 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 FUT3P21217 361 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 KHDC1LQ5JSQ8 128 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 SYT6Q5T7P8 510 aaPredicted RBP12.82□□□□□ -0.36
DDX55-212ENST00000544738 MS4A15Q8N5U1 240 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 SELENOIQ9C0D9 397 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 GHRLQ9UBU3 117 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 PEX16Q9Y5Y5 336 aa12.82□□□□□ -0.36
DDX55-212ENST00000544738 DNAH7Q8WXX0 4024 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 TXNL1O43396 289 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 CRTAPO75718 401 aaPredicted RBP12.81□□□□□ -0.36
DDX55-212ENST00000544738 SLC35B1P78383 322 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 DCTN2Q13561 401 aaKnown RBP12.81□□□□□ -0.36
DDX55-212ENST00000544738 STEAP3Q658P3 488 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 C10orf99Q6UWK7 81 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 SLC35E3Q7Z769 313 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 LYPD6Q86Y78 171 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 IZUMO1Q8IYV9 350 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 GAPTQ8N292 157 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 TFAP2CQ92754 450 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 ST6GALNAC6Q969X2 333 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 CST11Q9H112 138 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 BANF2Q9H503 90 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 FKBP14Q9NWM8 211 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
DDX55-212ENST00000544738 IGHV3-43A0A0B4J1X8 118 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 NCBP2LA6PVI3 153 aaKnown RBP12.8□□□□□ -0.36
DDX55-212ENST00000544738 SERPINE3A8MV23 424 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 SC5DO75845 299 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 IGHG2P01859 326 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 IGHV3-43DP0DP04 118 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 CD1BP29016 333 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 SLC6A1P30531 599 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 REG1BP48304 166 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 GPR50Q13585 617 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 RNLSQ5VYX0 342 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 SLC25A48Q6ZT89 311 aaKnown RBP12.8□□□□□ -0.36
DDX55-212ENST00000544738 ZNF554Q86TJ5 538 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 TGIF2LXQ8IUE1 241 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 FOXRED2Q8IWF2 684 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 COMMD1Q8N668 190 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 TMEM104Q8NE00 496 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 OR51D1Q8NGF3 324 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 OR4K15Q8NH41 348 aa12.8□□□□□ -0.36
DDX55-212ENST00000544738 UBALD1Q8TB05 177 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms