RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PSG2P11465 335 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 BCL3P20749 454 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 IL11P20809 199 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 COL5A1-AS1Q5SY13 56 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 OR1L6Q8NGR2 347 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 GINS3Q9BRX5 216 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 SH3BGRL3Q9H299 93 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 IGKV1D-42A0A075B6H8 117 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 IGHV3-43A0A0B4J1X8 118 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 PATE3B3GLJ2 98 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 IGHV3-43DP0DP04 118 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 ZNF708P17019 499 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 IER3P46695 156 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 RAB24Q969Q5 203 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 TMEM229AB2RXF0 380 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 FHL5Q5TD97 284 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 MPC1Q9Y5U8 109 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 ASXL3Q9C0F0 2248 aa16.88■□□□□ 0.29
SUDS3-204ENST00000543473 A0A1B0GTQ1 180 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 RPL36A-HNRNPH2H7BZ11 118 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 LINC01387J3KSC0 135 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 M0R2Z0 102 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 SPCS3P61009 180 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 CXorf66Q5JRM2 361 aaPredicted RBP16.87■□□□□ 0.29
SUDS3-204ENST00000543473 RHBDD2Q6NTF9 364 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 DUSP15Q9H1R2 295 aaPredicted RBP16.87■□□□□ 0.29
SUDS3-204ENST00000543473 CEBPEQ15744 281 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 PCGF1Q9BSM1 259 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 SLC22A20A6NK97 555 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 MEF2BQ02080 365 aaPredicted RBP16.87■□□□□ 0.29
SUDS3-204ENST00000543473 REC114Q7Z4M0 266 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 MRGPRDQ8TDS7 321 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 ZNF721Q8TF20 911 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 HES4Q9HCC6 221 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 ZNF355PQ9NSJ1 428 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 GNB1P62873 340 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 DEFB109BQ30KR1 87 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 TMEM222Q9H0R3 208 aa16.87■□□□□ 0.29
SUDS3-204ENST00000543473 C19orf35Q6ZS72 473 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 NAGKQ9UJ70 344 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 APC2O95996 2303 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 HIST3H3Q16695 136 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 DEFB124Q8NES8 71 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 CTHRC1Q96CG8 243 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 A0A0U1RQV5 110 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 SRD5A2P31213 254 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 RPS23P62266 143 aaKnown RBP16.86■□□□□ 0.29
SUDS3-204ENST00000543473 EIF3IQ13347 325 aaKnown RBP16.86■□□□□ 0.29
SUDS3-204ENST00000543473 ACER2Q5QJU3 275 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 MRPL54Q6P161 138 aaKnown RBP16.86■□□□□ 0.29
SUDS3-204ENST00000543473 ZNF519Q8TB69 540 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 UCN2Q96RP3 112 aa16.86■□□□□ 0.29
SUDS3-204ENST00000543473 GSX1Q9H4S2 264 aaPredicted RBP16.86■□□□□ 0.29
SUDS3-204ENST00000543473 GAMTQ14353 236 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 TEX30Q5JUR7 227 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 WDR25Q64LD2 544 aaPredicted RBP16.85■□□□□ 0.29
SUDS3-204ENST00000543473 BTNL3Q6UXE8 466 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 KCNK17Q96T54 332 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 DDA1Q9BW61 102 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 SRD5A3Q9H8P0 318 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 TMEM167BQ9NRX6 74 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 TRGV10A0A0A0MS01 117 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 TRAV39A0A0B4J263 110 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 CPEB3Q8NE35 698 aaKnown RBP16.85■□□□□ 0.29
SUDS3-204ENST00000543473 OR52M1Q8NGK5 317 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 SSMEM1Q8WWF3 244 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 SF3B5Q9BWJ5 86 aaKnown RBP16.85■□□□□ 0.29
SUDS3-204ENST00000543473 G6PC2Q9NQR9 355 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 TMEM14DPA8MWL7 114 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 DIRC3C9JPN6 131 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 IL2RAP01589 272 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 F2RP25116 425 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 RBM11P57052 281 aaKnown RBP16.85■□□□□ 0.29
SUDS3-204ENST00000543473 HES1Q14469 280 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 CRIPAKQ8N1N5 446 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 NGBQ9NPG2 151 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 PMS2P1A4D2B8 440 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 NHLH1Q02575 133 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 ABLIM2Q6H8Q1 611 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 ZNF343Q6P1L6 599 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 EGLN1Q9GZT9 426 aa16.85■□□□□ 0.29
SUDS3-204ENST00000543473 BMPR1BO00238 502 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 IFI6P09912 130 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 ZNF600Q6ZNG1 722 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 TEX50A0A1B0GTY4 177 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 SLC25A5P05141 298 aaKnown RBP16.84■□□□□ 0.29
SUDS3-204ENST00000543473 SMIM10L1P0DMW3 83 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 PAFAH1B2P68402 229 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 SLC22A18ASQ8N1D0 253 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 OR4P4Q8NGL7 312 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 SMIM10Q96HG1 83 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 FAM206AQ9NX38 181 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 PMELP40967 661 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 GLIPR1P48060 266 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 ARL16Q0P5N6 197 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 LYG1Q8N1E2 194 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 OR4A4PQ8NGN8 299 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 R3HDM4Q96D70 268 aa16.84■□□□□ 0.29
SUDS3-204ENST00000543473 NUDT16L1Q9BRJ7 211 aaKnown RBP16.84■□□□□ 0.29
SUDS3-204ENST00000543473 WDR61Q9GZS3 305 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms