RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SDK2Q58EX2 2172 aa2.9□□□□□ -1.94
SNHG1-217ENST00000541578 SMIM26A0A096LP01 95 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 TRAV8-4A0A0B4J246 113 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 IGHV3-66A0A0C4DH42 116 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 A0A1W2PP18 115 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 PQLC2LA1A4F0 135 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 FAM25AB3EWG3 89 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 FAM25CB3EWG5 89 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 FAM25GB3EWG6 89 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 E5RI56 91 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CCRL2O00421 344 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 ITGB1BP1O14713 200 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CD5LO43866 347 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CST8O60676 142 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 P01737 135 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 BCHEP06276 602 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CISD3P0C7P0 127 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 NQO2P16083 231 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 IGFBP3P17936 291 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 RCC1P18754 421 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 SLCO1A2P46721 670 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 GNG10P50151 68 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CDK9P50750 372 aaKnown RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 GNB2P62879 340 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 PRR3P79522 188 aaKnown RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CYP24A1Q07973 514 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 STX4Q12846 297 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 RBMY1FQ15415 496 aaKnown RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 MPPED2Q15777 294 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 UAP1Q16222 522 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 KLHL12Q53G59 568 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CDKL4Q5MAI5 379 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 LYPD2Q6UXB3 125 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 FBXW12Q6X9E4 464 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 BHLHA15Q7RTS1 189 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 SLC13A5Q86YT5 568 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CALHM1Q8IU99 346 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 GID4Q8IVV7 300 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CYP4Z2PQ8N1L4 340 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 C17orf78Q8N4C9 275 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 TMEM161BQ8NDZ6 487 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 OR10G6Q8NH81 332 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 DTD1Q8TEA8 209 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 TAMM41Q96BW9 452 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF414Q96IQ9 312 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 PPP1R36Q96LQ0 422 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF681Q96N22 645 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 RDH12Q96NR8 316 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 ZIM3Q96PE6 472 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 CAMK2N2Q96S95 79 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 C12orf57Q99622 126 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 MED10Q9BTT4 135 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 TOLLIPQ9H0E2 274 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 SAV1Q9H4B6 383 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 FBXO8Q9NRD0 319 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 FBXL12Q9NXK8 326 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 PSG8Q9UQ74 426 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 PUS1Q9Y606 427 aaKnown RBP eCLIP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 ZFC3H1O60293 1989 aaKnown RBP2.9□□□□□ -1.95
SNHG1-217ENST00000541578 SCN8AQ9UQD0 1980 aa2.9□□□□□ -1.95
SNHG1-217ENST00000541578 RELNP78509 3460 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 TRBV6-6A0A0A6YYG2 114 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 A0A1W2PNU3 283 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 GNG14A0A1W2PPG7 69 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 A0A1W2PRG6 482 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF729A6NN14 1252 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 LINC00587B1AMM8 73 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 F8VP50 259 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 MKRN2OSH3BPM6 223 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 KPNA4O00629 521 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 COCHO43405 550 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 EIF1BO60739 113 aaKnown RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZMPSTE24O75844 475 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 SLC22A5O76082 557 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 FADS2O95864 444 aaKnown RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 CST4P01036 141 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 TNNC2P02585 160 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 OR5AL1P0C617 328 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 SMIM6P0DI80 62 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF17P17021 662 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 TCN2P20062 427 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 PRPS1L1P21108 318 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 APLNRP35414 380 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 UGT2B10P36537 528 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 EIF1P41567 113 aaKnown RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ERFP50548 548 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 RAB13P51153 203 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 NDUFA8P51970 172 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 CEBPGP53567 150 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 MTPNP58546 118 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 TFAMQ00059 246 aaKnown RBP2.89□□□□□ -1.95
SNHG1-217ENST00000541578 OR1Q1Q15612 314 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 IGFBP7Q16270 282 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 TNXAQ16473 311 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 FAM27D1Q5T7N8 215 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 SDHAF4Q5VUM1 108 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 ZFP1Q6P2D0 407 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 FAHD1Q6P587 224 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 MDP1Q86V88 176 aa2.89□□□□□ -1.95
SNHG1-217ENST00000541578 PCP2Q8IVA1 136 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms