RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 HSPB1P04792 205 aaKnown RBP7.01□□□□□ -1.29
USP28-205ENST00000537706 IGF1P05019 195 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 ATP6V1E1P36543 226 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 RPS27P42677 84 aaKnown RBP7.01□□□□□ -1.29
USP28-205ENST00000537706 PPP5CP53041 499 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 TCTAP57738 103 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 RPS25P62851 125 aaKnown RBP7.01□□□□□ -1.29
USP28-205ENST00000537706 ZNF45Q02386 682 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 CEP78Q5JTW2 689 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 TCF23Q7RTU1 214 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 ACBD7Q8N6N7 88 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 SLC37A3Q8NCC5 494 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 OR2T10Q8NGZ9 312 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 OR4K13Q8NH42 304 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
USP28-205ENST00000537706 TXNL4BQ9NX01 149 aaKnown RBP7.01□□□□□ -1.29
USP28-205ENST00000537706 SLC2A8Q9NY64 477 aa7.01□□□□□ -1.29
USP28-205ENST00000537706 hCG_2014768A0A024R1R8 64 aa7□□□□□ -1.29
USP28-205ENST00000537706 TVP23AA6NH52 213 aa7□□□□□ -1.29
USP28-205ENST00000537706 ZNF737O75373 536 aa7□□□□□ -1.29
USP28-205ENST00000537706 MMP23AO75900 390 aa7□□□□□ -1.29
USP28-205ENST00000537706 LGALS1P09382 135 aaKnown RBP7□□□□□ -1.29
USP28-205ENST00000537706 GALP22466 123 aa7□□□□□ -1.29
USP28-205ENST00000537706 GABRR1P24046 479 aa7□□□□□ -1.29
USP28-205ENST00000537706 ACKR3P25106 362 aa7□□□□□ -1.29
USP28-205ENST00000537706 FGF9P31371 208 aaPredicted RBP7□□□□□ -1.29
USP28-205ENST00000537706 GDNFP39905 211 aa7□□□□□ -1.29
USP28-205ENST00000537706 HAAOP46952 286 aa7□□□□□ -1.29
USP28-205ENST00000537706 RAB9AP51151 201 aa7□□□□□ -1.29
USP28-205ENST00000537706 MADCAM1Q13477 382 aa7□□□□□ -1.29
USP28-205ENST00000537706 CRMP1Q14194 572 aa7□□□□□ -1.29
USP28-205ENST00000537706 SLC35F1Q5T1Q4 408 aa7□□□□□ -1.29
USP28-205ENST00000537706 ZNF322Q6U7Q0 402 aaPredicted RBP7□□□□□ -1.29
USP28-205ENST00000537706 TMPRSS11AQ6ZMR5 421 aa7□□□□□ -1.29
USP28-205ENST00000537706 CENPSQ8N2Z9 138 aa7□□□□□ -1.29
USP28-205ENST00000537706 OR8H1Q8NGG4 311 aa7□□□□□ -1.29
USP28-205ENST00000537706 OR2T4Q8NH00 348 aa7□□□□□ -1.29
USP28-205ENST00000537706 OTULINQ96BN8 352 aa7□□□□□ -1.29
USP28-205ENST00000537706 MROQ9BYG7 248 aa7□□□□□ -1.29
USP28-205ENST00000537706 BARHL1Q9BZE3 327 aa7□□□□□ -1.29
USP28-205ENST00000537706 MED20Q9H944 212 aa7□□□□□ -1.29
USP28-205ENST00000537706 IGHV4OR15-8A0A075B7B6 117 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 A0A087WW49 117 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 PNMA8CA0A1B0GUJ8 204 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 TRDV1A0A1B0GX56 115 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 MGST3O14880 152 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 ARPC3O15145 178 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 XRCC3O43542 346 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 UPK1BO75841 260 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 OCM2P0CE71 109 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 OCMP0CE72 109 aaPredicted RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 HIST1H1CP16403 213 aaKnown RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 GLIPR1P48060 266 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 RORCP51449 518 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 CD81P60033 236 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 GALEQ14376 348 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 OXA1LQ15070 435 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 KIAA2026Q5HYC2 2103 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 ZNF684Q5T5D7 378 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 LHFPL3Q86UP9 236 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 TPRX1Q8N7U7 411 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 HAVCR2Q8TDQ0 301 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 SLC25A46Q96AG3 418 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 PPP1R14BQ96C90 147 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 ALG8Q9BVK2 526 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 TOLLIPQ9H0E2 274 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 KLK15Q9H2R5 256 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 SRD5A3Q9H8P0 318 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 ADGRL4Q9HBW9 690 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 HES4Q9HCC6 221 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 ETAA1Q9NY74 926 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 OR6C3Q9NZP0 311 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 DAPK2Q9UIK4 370 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 PIGLQ9Y2B2 252 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 A0A1W2PPI3 338 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 DAPL1A0PJW8 107 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 IDH3BO43837 385 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 PFDN1O60925 122 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 LALBAP00709 142 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 ERP29P30040 261 aaKnown RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 RPS19P39019 145 aaKnown RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 PTGFRP43088 359 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 TAS2R43P59537 309 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 RPS7P62081 194 aaKnown RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 TNFRSF9Q07011 255 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 KIAA0141Q14154 515 aaPredicted RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 TRIM16LQ309B1 348 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 SPANXN2Q5MJ10 180 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 C22orf42Q6IC83 251 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 MOB3BQ86TA1 216 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 CCDC190Q86UF4 302 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 Q8N9W7 124 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 TEAD3Q99594 435 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 ALX4Q9H161 411 aaPredicted RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 ZNF107Q9UII5 783 aaPredicted RBP6.99□□□□□ -1.29
USP28-205ENST00000537706 SLC7A11Q9UPY5 501 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 GSTK1Q9Y2Q3 226 aa6.99□□□□□ -1.29
USP28-205ENST00000537706 LOC110117498-PIK3R3F6TDL0 507 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms