RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZNF184Q99676 751 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 VCXQ9H320 206 aa15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 BABAM2Q9NXR7 383 aa15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 SIRT4Q9Y6E7 314 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1B-204ENST00000536782 IGHV3-43A0A0B4J1X8 118 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 H0YHG0 523 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 AIPO00170 330 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 CCL24O00175 119 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 OGG1O15527 345 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 MOSP00540 346 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 MT-ND4P03905 459 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 IGHV3-43DP0DP04 118 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 CD1BP29016 333 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GP2P55259 537 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 DGCR2P98153 550 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GPR176Q14439 515 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 Q3ZCU0 254 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 CXorf66Q5JRM2 361 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ZNF497Q6ZNH5 498 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 Q8N9W7 124 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 TMEM104Q8NE00 496 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 ST6GALNAC6Q969X2 333 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 SMIM19Q96E16 107 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 RAX2Q96IS3 184 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 DUX3Q96PT4 197 aa15.47■□□□□ 0.07
TNFRSF1B-204ENST00000536782 A0A1W2PP11 408 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 RPLP1P05386 114 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 RAB25P57735 213 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 GPR50Q13585 617 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 FAM53AQ6NSI3 398 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 OR8H1Q8NGG4 311 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 OR13C5Q8NGS8 318 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 OR8U1Q8NH10 309 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 S1PR3Q99500 378 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 RASL11BQ9BPW5 248 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 SPACA1Q9HBV2 294 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 RAB9BQ9NP90 201 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 PLSCR3Q9NRY6 295 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 CKLFQ9UBR5 152 aa15.46■□□□□ 0.07
TNFRSF1B-204ENST00000536782 MCRIP1C9JLW8 97 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 SPINT2O43291 252 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TXNL1O43396 289 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 RRP9O43818 475 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 IGFBP3P17936 291 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 MYL12AP19105 171 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CAPGP40121 348 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 FOXE3Q13461 319 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 GHSRQ92847 366 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 GNG12Q9UBI6 72 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TRAPPC2LQ9UL33 140 aa15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 DIMT1Q9UNQ2 313 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 EXOSC1Q9Y3B2 195 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TRBV5-5A0A0J9YX44 114 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ZNF736B4DX44 427 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 C12orf77C9JDV5 145 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 SLC31A2O15432 143 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 RAMP3O60896 148 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 GPX5O75715 221 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 LALBAP00709 142 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ELANEP08246 267 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CDX1P47902 265 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 KIR2DS1Q14954 304 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TMEM30BQ3MIR4 351 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 Q499Y3 187 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 SYT6Q5T7P8 510 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 LCNL1Q6ZST4 164 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 SLC25A48Q6ZT89 311 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ZNF439Q8NDP4 499 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TFAP2CQ92754 450 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 WWC2-AS2Q96NR7 200 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ETAA1Q9NY74 926 aa15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 RCC2Q9P258 522 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1B-204ENST00000536782 MAGEA13PA6NCF6 341 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 SOX6P35712 828 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ZNF137PP52743 207 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 DEFB136Q30KP8 78 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 YIF1BQ5BJH7 314 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 C6orf183Q5T699 404 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 DMKNQ6E0U4 476 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 C8orf59Q8N0T1 100 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 RNF152Q8N8N0 203 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 OR5M8Q8NGP6 311 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 OR4K15Q8NH41 348 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 MUL1Q969V5 352 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 MRPS24Q96EL2 167 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CHCHD3Q9NX63 227 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CLEC2DQ9UHP7 191 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 MRPS28Q9Y2Q9 187 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 STAB2Q8WWQ8 2551 aa15.43■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TRAV8-7A0A075B6U6 113 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 FSTP19883 344 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 VDAC1P21796 283 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 ZNF134P52741 427 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 MED21Q13503 144 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 CT45A1Q5HYN5 189 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 RAB12Q6IQ22 244 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 TRAT1Q6PIZ9 186 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 GLIPR1L1Q6UWM5 242 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 PRR18Q8N4B5 295 aa15.42■□□□□ 0.06
TNFRSF1B-204ENST00000536782 JAGN1Q8N5M9 183 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms