RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FTCDNL1E5RQL4 147 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 LIN7AO14910 233 aaPredicted RBP1.99□□□□□ -2.09
PRKDC-205ENST00000535375 ADAP1O75689 374 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 CPSF4O95639 269 aaKnown RBP1.99□□□□□ -2.09
PRKDC-205ENST00000535375 GPR75O95800 540 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 OCMP0CE72 109 aaPredicted RBP1.99□□□□□ -2.09
PRKDC-205ENST00000535375 CTLA4P16410 223 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 HSPA13P48723 471 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 RAB2AP61019 212 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 GTF2BQ00403 316 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 AMMECR1LQ6DCA0 310 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 XKRXQ6PP77 449 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 CYHR1Q6ZMK1 362 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 PLEKHG7Q6ZR37 379 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 ATP6V1C2Q8NEY4 427 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 BPIFB6Q8NFQ5 453 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 OR9I1Q8NGQ6 314 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 STOML3Q8TAV4 291 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 DNAJB3Q8WWF6 145 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 APOBEC3DQ96AK3 386 aaPredicted RBP1.99□□□□□ -2.09
PRKDC-205ENST00000535375 TAMM41Q96BW9 452 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 PKMYT1Q99640 499 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 UPF3BQ9BZI7 483 aaKnown RBP1.99□□□□□ -2.09
PRKDC-205ENST00000535375 HDHD2Q9H0R4 259 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 UBQLN4Q9NRR5 601 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 ASF1BQ9NVP2 202 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 OR5V1Q9UGF6 321 aa1.99□□□□□ -2.09
PRKDC-205ENST00000535375 UNC79Q9P2D8 2635 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 IGKV1D-37A0A075B6S9 117 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 A0A1B0GU33 70 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 J3QKU1 62 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 CTSEP14091 401 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 PVALBP20472 110 aaPredicted RBP1.98□□□□□ -2.09
PRKDC-205ENST00000535375 PSMD8P48556 350 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 C4orf26Q17RF5 130 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 TBC1D28Q2M2D7 210 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 HENMT1Q5T8I9 393 aaKnown RBP1.98□□□□□ -2.09
PRKDC-205ENST00000535375 SDHAF4Q5VUM1 108 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 DRAM2Q6UX65 266 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 SLC13A5Q86YT5 568 aaPredicted RBP1.98□□□□□ -2.09
PRKDC-205ENST00000535375 CPNE9Q8IYJ1 553 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 FER1L6-AS1Q8NA97 138 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 Q8NAQ8 132 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 OR4A5Q8NH83 315 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 KLF6Q99612 283 aaPredicted RBP1.98□□□□□ -2.09
PRKDC-205ENST00000535375 C7orf50Q9BRJ6 194 aaKnown RBP1.98□□□□□ -2.09
PRKDC-205ENST00000535375 CRCT1Q9UGL9 99 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 RPUSD1Q9UJJ7 312 aaKnown RBP1.98□□□□□ -2.09
PRKDC-205ENST00000535375 MCTS1Q9ULC4 181 aaKnown RBP1.98□□□□□ -2.09
PRKDC-205ENST00000535375 TP53TG1Q9Y2A0 90 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 LINC00588Q9Y4M8 146 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 ATP6V1DQ9Y5K8 247 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 MTCH2Q9Y6C9 303 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 U3KQK5 164 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 SSH2Q76I76 1423 aa1.98□□□□□ -2.09
PRKDC-205ENST00000535375 IGKV1-12A0A0C4DH73 117 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 IGKV1D-12P01611 117 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 HIST1H1CP16403 213 aaKnown RBP1.97□□□□□ -2.09
PRKDC-205ENST00000535375 RCVRNP35243 200 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 ACTR1BP42025 376 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 DYNLL1P63167 89 aaKnown RBP1.97□□□□□ -2.09
PRKDC-205ENST00000535375 MGAT3Q09327 533 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 BCL2A1Q16548 175 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 CLEC12BQ2HXU8 276 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 CENPWQ5EE01 88 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 SPNS3Q6ZMD2 512 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 PAGE2Q7Z2X7 111 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 LYZL2Q7Z4W2 148 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 NIT1Q86X76 327 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 FUNDC1Q8IVP5 155 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 C2orf73Q8N5S3 287 aaPredicted RBP1.97□□□□□ -2.09
PRKDC-205ENST00000535375 OR5D18Q8NGL1 313 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 OR5K1Q8NHB7 308 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 DUSP21Q9H596 190 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 ZNF286AQ9HBT8 521 aa1.97□□□□□ -2.09
PRKDC-205ENST00000535375 ZNHIT6Q9NWK9 470 aaKnown RBP1.97□□□□□ -2.09
PRKDC-205ENST00000535375 TRBV24-1A0A075B6N3 115 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 A0A0B4J2C4 111 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 C1orf232A0A0U1RR37 186 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 GGTLC3B5MD39 225 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 D6RAR5 112 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 E7EQL1 145 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 H3BSA7 217 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 LECT2O14960 151 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 IGHMP01871 453 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 OPN1SWP03999 348 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 PET100P0DJ07 73 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 PSKH1P11801 424 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 CD40LGP29965 261 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 CLDN12P56749 244 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 C10orf91Q5T1B1 145 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 TTC33Q6PID6 262 aaPredicted RBP1.96□□□□□ -2.1
PRKDC-205ENST00000535375 LYPD6Q86Y78 171 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 FAM9CQ8IZT9 166 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 RIBC1Q8N443 379 aaPredicted RBP1.96□□□□□ -2.1
PRKDC-205ENST00000535375 YIPF7Q8N8F6 280 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 ZNRF2Q8NHG8 242 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 GALMQ96C23 342 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 OTUB2Q96DC9 234 aa1.96□□□□□ -2.1
PRKDC-205ENST00000535375 SMIM12Q96EX1 92 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms