RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 PFDN5Q99471 154 aa3.4□□□□□ -1.87
C11orf54-213ENST00000533585 KLF6Q99612 283 aaPredicted RBP3.4□□□□□ -1.87
C11orf54-213ENST00000533585 CDX2Q99626 313 aaPredicted RBP3.4□□□□□ -1.87
C11orf54-213ENST00000533585 SAMD10Q9BYL1 202 aa3.4□□□□□ -1.87
C11orf54-213ENST00000533585 NANOGQ9H9S0 305 aa3.4□□□□□ -1.87
C11orf54-213ENST00000533585 PDS5BQ9NTI5 1447 aa3.4□□□□□ -1.87
C11orf54-213ENST00000533585 WASHC3Q9Y3C0 194 aa3.4□□□□□ -1.87
C11orf54-213ENST00000533585 DOCK7Q96N67 2140 aa3.4□□□□□ -1.87
C11orf54-213ENST00000533585 NID2Q14112 1375 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 YTHDC2Q9H6S0 1430 aaKnown RBP3.39□□□□□ -1.87
C11orf54-213ENST00000533585 IGHV3-74A0A0B4J1X5 117 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 CCL15-CCL14A0A0B4J2E2 113 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 A0A0X1KG70 313 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 MAP1LC3B2A6NCE7 125 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
C11orf54-213ENST00000533585 TCF21O43680 179 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 PI15O43692 258 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 SLC37A4O43826 429 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 MFSD11O43934 449 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 FGF6P10767 208 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 ADRB3P13945 408 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 IL3RAP26951 378 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 DIO3P55073 304 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 TMEM267Q0VDI3 215 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-213ENST00000533585 ERCC8Q13216 396 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 CCL15Q16663 113 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 RSPO1Q2MKA7 263 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-213ENST00000533585 ABCA11PQ4W5N1 156 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 AKR1C8PQ5T2L2 129 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 C1orf194Q5T5A4 169 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 TMEM78Q5T7P6 136 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 GLYATQ6IB77 296 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 DCUN1D2Q6PH85 259 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 Q6ZRU5 148 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 ZNF584Q8IVC4 421 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 ZBTB8OSQ8IWT0 167 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 OR2M7Q8NG81 312 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 OR1J4Q8NGS1 313 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 OR8S1Q8NH09 359 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 OR52P1PQ8NH57 321 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 PTX4Q96A99 478 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 SLC25A44Q96H78 314 aaPredicted RBP3.39□□□□□ -1.87
C11orf54-213ENST00000533585 YPEL4Q96NS1 127 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 MAP1LC3BQ9GZQ8 125 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 RNASE7Q9H1E1 156 aaKnown RBP3.39□□□□□ -1.87
C11orf54-213ENST00000533585 UQCC1Q9NVA1 299 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 LINC00527Q9UJ94 153 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 ERCC6Q03468 1493 aa3.39□□□□□ -1.87
C11orf54-213ENST00000533585 ROCK2O75116 1388 aaKnown RBP3.38□□□□□ -1.87
C11orf54-213ENST00000533585 DHX57Q6P158 1386 aaKnown RBP3.38□□□□□ -1.87
C11orf54-213ENST00000533585 NPATQ14207 1427 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 DNMT1P26358 1616 aaKnown RBP3.38□□□□□ -1.87
C11orf54-213ENST00000533585 TRAV8-1A0A0A6YYK1 113 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 EPOPA6NHQ4 379 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 ZNF850A8MQ14 1090 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 KLLNB2CW77 178 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 KRTAP4-16G5E9R7 235 aaPredicted RBP3.38□□□□□ -1.87
C11orf54-213ENST00000533585 SLC17A3O00476 420 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 SOD3P08294 240 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 FBP1P09467 338 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 GZMHP20718 246 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 PHBP35232 272 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 LINC00205P59089 165 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 MPPED2Q15777 294 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 ZNF239Q16600 458 aaKnown RBP3.38□□□□□ -1.87
C11orf54-213ENST00000533585 TIMM50Q3ZCQ8 353 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 KLHL12Q53G59 568 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 TOMM20LQ6UXN7 152 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 ACP7Q6ZNF0 438 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 GOLT1AQ6ZVE7 132 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 FAM19A3Q7Z5A8 133 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 ST6GALNAC3Q8NDV1 305 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 LHFPL5Q8TAF8 219 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 OLFM3Q96PB7 478 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 LRRC61Q9BV99 259 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 RSPO3Q9BXY4 272 aaPredicted RBP3.38□□□□□ -1.87
C11orf54-213ENST00000533585 TBL1XR1Q9BZK7 514 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 ZNF436Q9C0F3 470 aaPredicted RBP3.38□□□□□ -1.87
C11orf54-213ENST00000533585 NOX3Q9HBY0 568 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 TAS2R1Q9NYW7 299 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 DEC1Q9P2X7 70 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 PRNDQ9UKY0 176 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 FIS1Q9Y3D6 152 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 C2orf16Q68DN1 1984 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 RFX7Q2KHR2 1363 aa3.38□□□□□ -1.87
C11orf54-213ENST00000533585 CEP152O94986 1710 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 TRAPPC13A5PLN9 417 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 RFPL4AA6NLU0 287 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 F5H5P2 479 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 RFPL4AL1F8VTS6 287 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 INMT-MINDY4F8WBC2 141 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 LGALS9O00182 355 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 CST8O60676 142 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 SMIM24O75264 130 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 CCNKO75909 580 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 SERPINE1P05121 402 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 TFPTP0C1Z6 253 aa3.37□□□□□ -1.87
C11orf54-213ENST00000533585 IMPA1P29218 277 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms