RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MCRIP1C9JLW8 97 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 EBAG9O00559 213 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 CD1BP29016 333 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 HOXD3P31249 432 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-207ENST00000531727 GLIPR1L1Q6UWM5 242 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 JAGN1Q8N5M9 183 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 TMEM104Q8NE00 496 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 SETD9Q8NE22 299 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 KLHL30-AS1Q8NEE0 82 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 DPF1Q92782 380 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 MUL1Q969V5 352 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 OR14A2Q96R54 314 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 ABCG5Q9H222 651 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 RAB9BQ9NP90 201 aa13.26□□□□□ -0.29
CPSF1-207ENST00000531727 LIN7CQ9NUP9 197 aaKnown RBP13.26□□□□□ -0.29
CPSF1-207ENST00000531727 MRPS28Q9Y2Q9 187 aaKnown RBP13.26□□□□□ -0.29
CPSF1-207ENST00000531727 LINC01548A6NM66 108 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 C12orf77C9JDV5 145 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 AP4M1O00189 453 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 SPINT2O43291 252 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 MOSP00540 346 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 MYCNOSP40205 109 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 GPR12P47775 334 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 ADARB1P78563 741 aaKnown RBP13.25□□□□□ -0.29
CPSF1-207ENST00000531727 ST3GAL4Q11206 333 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 LRRC36Q1X8D7 754 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 TMEM30BQ3MIR4 351 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 SYT6Q5T7P8 510 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-207ENST00000531727 RAB12Q6IQ22 244 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 SLC25A48Q6ZT89 311 aaKnown RBP13.25□□□□□ -0.29
CPSF1-207ENST00000531727 CDH26Q8IXH8 852 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 Q8N9W7 124 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 ZNF439Q8NDP4 499 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 GGHQ92820 318 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 P2RX4Q99571 388 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 MCRIP2Q9BUT9 160 aaKnown RBP13.25□□□□□ -0.29
CPSF1-207ENST00000531727 C8orf4Q9NR00 106 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 TRAPPC2LQ9UL33 140 aa13.25□□□□□ -0.29
CPSF1-207ENST00000531727 A0A1W2PPK0 400 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 SLC31A2O15432 143 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 TXNL1O43396 289 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 HBZP02008 142 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 ZNF137PP52743 207 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 TAS2R43P59537 309 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 C6orf183Q5T699 404 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 TEX38Q6PEX7 206 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 ZNF695Q8IW36 515 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 GAPTQ8N292 157 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 DHRSXQ8N5I4 330 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 PACRGLQ8N7B6 248 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 OR4K15Q8NH41 348 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 PLSCR3Q9NRY6 295 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 GNG12Q9UBI6 72 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 PEX16Q9Y5Y5 336 aa13.24□□□□□ -0.29
CPSF1-207ENST00000531727 PNMA8CA0A1B0GUJ8 204 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 FAM90A10PA6NDY2 464 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 EFCAB10A6NFE3 127 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 FAM90A7PA6NKC0 464 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 FAM90A23PA8MXZ1 464 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 ZNF736B4DX44 427 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-207ENST00000531727 MGMTP16455 207 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 PNLIPRP3Q17RR3 467 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 CT45A1Q5HYN5 189 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 AWAT2Q6E213 333 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 TRAT1Q6PIZ9 186 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 LYPD6Q86Y78 171 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 OR8H1Q8NGG4 311 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 CT45A3Q8NHU0 189 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 DERL3Q96Q80 235 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 S1PR3Q99500 378 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 RASL11BQ9BPW5 248 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 BANF2Q9H503 90 aa13.23□□□□□ -0.29
CPSF1-207ENST00000531727 CNOT2Q9NZN8 540 aaKnown RBP13.23□□□□□ -0.29
CPSF1-207ENST00000531727 CA11O75493 328 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 SC5DO75845 299 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 MAS1P04201 325 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 GLAP06280 429 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 RCC1P18754 421 aaPredicted RBP13.22□□□□□ -0.29
CPSF1-207ENST00000531727 ZNF134P52741 427 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 DOC2BQ14184 412 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 VAX1Q5SQQ9 334 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 PRR18Q8N4B5 295 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 OR10V1Q8NGI7 309 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 OR1L1Q8NH94 360 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 RAX2Q96IS3 184 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 Q96M66 194 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 SELENOIQ9C0D9 397 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 COL7A1Q02388 2944 aa13.22□□□□□ -0.29
CPSF1-207ENST00000531727 H0YHG0 523 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.29
CPSF1-207ENST00000531727 CRTAPO75718 401 aaPredicted RBP13.21□□□□□ -0.29
CPSF1-207ENST00000531727 RPLP1P05386 114 aaKnown RBP13.21□□□□□ -0.29
CPSF1-207ENST00000531727 CD1AP06126 327 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 CELP19835 753 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 FUT3P21217 361 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 CAPGP40121 348 aa13.21□□□□□ -0.29
CPSF1-207ENST00000531727 VHLP40337 213 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms