RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 KIR3DL3Q8N743 410 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 OR52I2Q8NH67 350 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 LHX4Q969G2 390 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 ZNF286AQ9HBT8 521 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 IFT46Q9NQC8 304 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 OPN4Q9UHM6 478 aa11.24□□□□□ -0.61
CD44-224ENST00000526669 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 A8MV72 311 aaPredicted RBP11.23□□□□□ -0.61
CD44-224ENST00000526669 SPINT2O43291 252 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 SCTP09683 121 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 GSTT2P0CG29 244 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 GSTT2BP0CG30 244 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 GATA3P23771 443 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 DTYMKP23919 212 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 PITPNAQ00169 270 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 GNMTQ14749 295 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 PYHIN1Q6K0P9 492 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 TRAT1Q6PIZ9 186 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 OR10V1Q8NGI7 309 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 GPX8Q8TED1 209 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 IL1F10Q8WWZ1 152 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 KIRREL1Q96J84 757 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 SESN1Q9Y6P5 492 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 V9GYH0 126 aa11.23□□□□□ -0.61
CD44-224ENST00000526669 NSD1Q96L73 2696 aaPredicted RBP11.23□□□□□ -0.61
CD44-224ENST00000526669 hCG_1809904A0A1W2PP81 198 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PPE2 198 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PR64 198 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PRV1 198 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 TRDCB7Z8K6 153 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 J3QLI3 93 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 SDCBPO00560 298 aaPredicted RBP11.22□□□□□ -0.61
CD44-224ENST00000526669 ORC5O43913 435 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 LPLP06858 475 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 IGHV4-38-2P0DP08 117 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 GZMHP20718 246 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 GNG10P50151 68 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 PYDC2Q56P42 97 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 SPANXN2Q5MJ10 180 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 OR52W1Q6IF63 320 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 HEPN1Q6WQI6 88 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 PNKDQ8N490 385 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 OR52L2PQ8NGH6 319 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 SOSTQ9BQB4 213 aa11.22□□□□□ -0.61
CD44-224ENST00000526669 METTL8Q9H825 291 aaKnown RBP11.22□□□□□ -0.61
CD44-224ENST00000526669 FN1P02751 2386 aaKnown RBP11.21□□□□□ -0.61
CD44-224ENST00000526669 A0A1W2PPE3 182 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 NPIPB11E5RHQ5 1161 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 RNASEK-C17orf49H0YIS7 233 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 F2RL2O00254 374 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 BET1O15155 118 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 FABP7O15540 132 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 PRTN3P24158 256 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 FPR2P25090 351 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 CBX5P45973 191 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 HERPUD1Q15011 391 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 ZNF79Q15937 498 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 IGSF11Q5DX21 431 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 FAM120AOSQ5T036 256 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 RUSC1-AS1Q66K80 236 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 HCP5Q6MZN7 132 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 HOGA1Q86XE5 327 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 BEST4Q8NFU0 473 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 SNAPC3Q92966 411 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 UPRTQ96BW1 309 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 DMRTB1Q96MA1 342 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 OCSTAMPQ9BR26 566 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 SCPEP1Q9HB40 452 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 GFOD1Q9NXC2 390 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 OR1A1Q9P1Q5 309 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 SLC23A1Q9UHI7 598 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 MGAT4AQ9UM21 535 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 ZFHX3Q15911 3703 aa11.21□□□□□ -0.61
CD44-224ENST00000526669 IGKV1-6A0A0C4DH72 117 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 GABARAPH6UMI1 98 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 SULT1C2O00338 296 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 RBP4P02753 201 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 PPP1CCP36873 323 aaKnown RBP11.2□□□□□ -0.62
CD44-224ENST00000526669 ARPC4P59998 168 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 KLF17Q5JT82 389 aaPredicted RBP11.2□□□□□ -0.62
CD44-224ENST00000526669 C1orf122Q6ZSJ8 110 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 MFSD4AQ8N468 514 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 SMIM4Q8WVI0 70 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 FCAMRQ8WWV6 532 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 TNFRSF14Q92956 283 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 TMEM133Q9H2Q1 129 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 RAB9BQ9NP90 201 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 GNG12Q9UBI6 72 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 RABL2AQ9UBK7 228 aaPredicted RBP11.2□□□□□ -0.62
CD44-224ENST00000526669 KLK11Q9UBX7 282 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 RABL2BQ9UNT1 228 aa11.2□□□□□ -0.62
CD44-224ENST00000526669 IGHV2-26A0A0B4J1V2 119 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 INAFM1C9JVW0 142 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 CTDSPLO15194 276 aa11.19□□□□□ -0.62
CD44-224ENST00000526669 SLC31A2O15432 143 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms