RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SULT4A1Q9BR01 284 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 NICN1Q9BSH3 213 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 FAAP24Q9BTP7 215 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 CENPOQ9BU64 300 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 CHIAQ9BZP6 476 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 MMP28Q9H239 520 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 LINC00574Q9H8X3 128 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 TAF9BQ9HBM6 251 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZNF286AQ9HBT8 521 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZNF581Q9P0T4 197 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 DPM3Q9P2X0 92 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 JPT1Q9UK76 154 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 HSF4Q9ULV5 492 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 HILPDAQ9Y5L2 63 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 ETV7Q9Y603 341 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SOX21Q9Y651 276 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 VPS13CQ709C8 3753 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZANQ9Y493 2812 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 NF1P21359 2839 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 SETD2Q9BYW2 2564 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A075B6Q4 140 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 TRAV39A0A0B4J263 110 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A1B0GUS0 222 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 SHISA3A0PJX4 238 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 FAM181BA6NEQ2 426 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 TRIM64CA6NLI5 447 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 SERPINE3A8MV23 424 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 VGLL3A8MV65 326 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 C12orf77C9JDV5 145 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 NPIPB11E5RHQ5 1161 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 BUB1B-PAK6H3BSN5 160 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 J3QR06 171 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 HAX1O00165 279 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 SOCS1O15524 211 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 HSPA12AO43301 675 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 TXNL1O43396 289 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 MMP23AO75900 390 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 HKR1P10072 659 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 SLC2A2P11168 524 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 HIST1H1DP16402 221 aaKnown RBP4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 KIR2DS4P43632 304 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 SERPINB10P48595 397 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 RAB7AP51149 207 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 DYNLT3P51808 116 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 RAG2P55895 527 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 LSM3P62310 102 aaKnown RBP4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 KIR2DS1Q14954 304 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 LY6EQ16553 131 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 Q3ZCU0 254 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 ARSJQ5FYB0 599 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 TPTE2P1Q5T6R2 138 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 STEAP3Q658P3 488 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 SIGIRRQ6IA17 410 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 LHFPL4Q7Z7J7 247 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 GAPTQ8N292 157 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 FAM89BQ8N5H3 189 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR2AK2Q8NG84 335 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR4P4Q8NGL7 312 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR10R2Q8NGX6 335 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 UBALD1Q8TB05 177 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 MRPL30Q8TCC3 161 aaKnown RBP4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 LGALS14Q8TCE9 139 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 IL1F10Q8WWZ1 152 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 AP3S1Q92572 193 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 LEAP2Q969E1 77 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 YIPF6Q96EC8 236 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 ARHGAP5-AS1Q96IT6 56 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 FUNDC2Q9BWH2 189 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 PECRQ9BY49 303 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 NPFFR1Q9GZQ6 430 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 MEGF9Q9H1U4 602 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 BEX1Q9HBH7 125 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR2S2Q9NQN1 319 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 MBNL3Q9NUK0 354 aaKnown RBP4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 GFOD1Q9NXC2 390 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 AK3Q9UIJ7 227 aa4.38□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A0A6YYD4 124 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 TRBV6-6A0A0A6YYG2 114 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A0A6YYH2 397 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 IGHV3-43A0A0B4J1X8 118 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A0B4J203 849 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 TMEM89A2RUT3 159 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 A6NJ64 397 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 C15orf65H3BRN8 121 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 HSD17B6O14756 317 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 LDLRAD4O15165 306 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 PEX14O75381 377 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 NDUFA7O95182 113 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 NAPSAO96009 420 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 IGLV1-47P01700 117 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 IGHV3-7P01780 117 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 GAPDHP04406 335 aaKnown RBP4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 GSTP1P09211 210 aaKnown RBP4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 FAM106CPP0CH98 169 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 SMIM18P0DKX4 95 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 CGB3P0DN86 165 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 CGB7P0DN87 165 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 IGHV3-43DP0DP04 118 aa4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 SNRPBP14678 240 aaKnown RBP4.37□□□□□ -1.71
HMGB1P40-201ENST00000525121 GNB3P16520 340 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms