RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ISG15P05161 165 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 HLA-DQB2P05538 268 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 DBIP07108 87 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CRYGBP07316 175 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CTSDP07339 412 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 IL3P08700 152 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 PSG2P11465 335 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 HLA-DOBP13765 273 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ELK1P19419 428 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CDKN1AP38936 164 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 APOBEC1P41238 236 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR3A4PP47883 348 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 GLIPR1P48060 266 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CAMPP49913 170 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 RND2P52198 227 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TCL1AP56279 114 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TPPP2P59282 170 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 SNRPGP62308 76 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 BTG2P78543 158 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ARL16Q0P5N6 197 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 FUT7Q11130 342 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 EIF2B1Q14232 305 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ENDOGQ14249 297 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ANKRD55Q3KP44 614 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ATP6AP1LQ52LC2 224 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 SOHLH1Q5JUK2 328 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CLLU1OSQ5K130 101 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 C12orf54Q6X4T0 127 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 Q6ZN92 141 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TPRG1Q6ZUI0 275 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 PAQR9Q6ZVX9 377 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TSEN54Q7Z6J9 526 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC5A8Q8N695 610 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 GCSAMQ8N6F7 178 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 STPG4Q8N801 248 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ZFP41Q8N8Y5 198 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 C5orf17Q8NAS9 161 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR8G5Q8NG78 346 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR5AU1Q8NGC0 362 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR11G2Q8NGC1 345 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR2T27Q8NH04 317 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR13C6PQ8NH95 151 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 Q8WTZ3 238 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC38A5Q8WUX1 472 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 GEMIN6Q8WXD5 167 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 DCUN1D4Q92564 292 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 NRGNQ92686 78 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 FRZBQ92765 325 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 BADQ92934 168 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TSLPQ969D9 159 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 FGGYQ96C11 551 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 PPCDCQ96CD2 204 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CXorf40BQ96DE9 158 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 VSTM2LQ96N03 204 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 MS4A10Q96PG2 267 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TBX5Q99593 518 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 GINS3Q9BRX5 216 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 RHNO1Q9BSD3 238 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 DERL1Q9BUN8 251 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 ST6GALNAC5Q9BVH7 336 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC17A9Q9BYT1 436 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 STRADBQ9C0K7 418 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 MFSD1Q9H3U5 465 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TMEM231Q9H6L2 316 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 INPP5EQ9NRR6 644 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 MRPL17Q9NRX2 175 aaKnown RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 NECAP2Q9NVZ3 263 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 WSB2Q9NYS7 404 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TAS2R16Q9NYV7 291 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 KCNIP1Q9NZI2 227 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 DNAJC27Q9NZQ0 273 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 TAAR2Q9P1P5 351 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 PLAGL1Q9UM63 463 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 OR2W1Q9Y3N9 320 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 WDR45Q9Y484 360 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 COL11A1P12107 1806 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 CASP8AP2Q9UKL3 1982 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 THSD7BQ9C0I4 1608 aa3.92□□□□□ -1.78
HMGB3P13-201ENST00000511263 SCN10AQ9Y5Y9 1956 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 CXorf51AA0A1B0GTR3 108 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 LRP5LA4QPB2 252 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 A6NDN8 102 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 TLCD2A6NGC4 264 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 H7BYZ3 331 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 DEGS1O15121 323 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 PLPP2O43688 288 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 UPK3AO75631 287 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 DIRAS1O95057 198 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 ETHE1O95571 254 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC16A8O95907 504 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 CD160O95971 181 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 SP1P08047 785 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 C8orf89P0DMQ9 161 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 HIST1H1TP22492 207 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 LMO2P25791 158 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 SOX3P41225 446 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 SLC6A12P48065 614 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 POLR2JP52435 117 aaKnown RBP3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 PDX1P52945 283 aa3.91□□□□□ -1.78
HMGB3P13-201ENST00000511263 DIO3P55073 304 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms