RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 A0A1W2PRM7 423 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 IGSF23A1L1A6 192 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 C7orf77A4D0Y5 90 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 NAGKQ9UJ70 344 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 RGPD3A6NKT7 1758 aaPredicted RBP14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 PGA4P0DJD7 388 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 B2MP61769 119 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 RTP5Q14D33 572 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 TEPPQ6URK8 271 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 Q8WTZ3 238 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 WIPI2Q9Y4P8 454 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 TRAV39A0A0B4J263 110 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 PITX3O75364 302 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 CXorf1O96002 111 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 PGA5P0DJD9 388 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 IL11P20809 199 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 C10orf113Q5VZT2 155 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 DSPPQ9NZW4 1301 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 OR10C1Q96KK4 312 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 CLEC5AQ9NY25 188 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM87AP0C7U9 286 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 OR4D10Q8NGI6 311 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 ISG15P05161 165 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 NAAAQ02083 359 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 OR4X1Q8NH49 305 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 KCNK7Q9Y2U2 307 aa14.38□□□□□ -0.11
PCDHA1-203ENST00000504120 PAGE4O60829 102 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 P01737 135 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 HLA-DQB1P01920 261 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 FGF5P12034 268 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 PRDX2P32119 198 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 FGF12P61328 243 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 IFITM3Q01628 133 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 KHDC3LQ587J8 217 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 TEX30Q5JUR7 227 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 C5orf17Q8NAS9 161 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 OR5R1Q8NH85 324 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 TDRD15B5MCY1 1934 aaKnown RBP14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 PRSS53Q2L4Q9 553 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 WDR90Q96KV7 1748 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM74A7A6NL05 159 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM157CP0CG43 387 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 COL10A1Q03692 680 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 SLC25A47Q6Q0C1 308 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 ZNF441Q8N8Z8 693 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 IL22RA2Q969J5 263 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 ASCL3Q9NQ33 180 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 HOXD4P09016 255 aaPredicted RBP14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 ATP6V0CP27449 155 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 SRP14P37108 136 aaKnown RBP14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 ISOC2Q96AB3 205 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 LPAR5Q9H1C0 372 aa14.37□□□□□ -0.11
PCDHA1-203ENST00000504120 H3BQ15 152 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 ZNF253O75346 499 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 MEOX2P50222 304 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 P2RY6Q15077 328 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 DOLPP1Q86YN1 238 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 SCN10AQ9Y5Y9 1956 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 IGHV3OR15-7A0A075B7D8 119 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 IGLV1-36A0A0B4J1U3 117 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 HPRT1P00492 218 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 MMP9P14780 707 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 DPF1Q92782 380 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 DIRC2Q96SL1 478 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 RSRP1Q9BUV0 290 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 DDA1Q9BW61 102 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 GSX1Q9H4S2 264 aaPredicted RBP14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 CLN8Q9UBY8 286 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 HELTA6NFD8 242 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 J3QR06 171 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 ZNF250P15622 560 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 PPP1CCP36873 323 aaKnown RBP14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 RIGQ13278 110 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 HLA-DRB5Q30154 266 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 C1orf185Q5T7R7 199 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 CD200R1LQ6Q8B3 271 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM214BQ7L5A3 538 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 CBLN2Q8IUK8 224 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 SMDT1Q9H4I9 107 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 PPIAL4EA0A075B759 164 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 PPIAL4DF5H284 164 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 SCGB1C2P0DMR2 95 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 PPIAL4FP0DN26 164 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 VSIG10L2P0DP72 767 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 RPL30P62888 115 aaKnown RBP14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 MARS2Q96GW9 593 aaKnown RBP14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 TMEM208Q9BTX3 173 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 SLC25A10Q9UBX3 287 aaPredicted RBP14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 PPIAL4AQ9Y536 164 aa14.36□□□□□ -0.11
PCDHA1-203ENST00000504120 RAB29O14966 203 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 UCP2P55851 309 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FOXL2P58012 376 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 TMEM251Q8N6I4 163 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 TRAF4Q9BUZ4 470 aaPredicted RBP14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 GHITMQ9H3K2 345 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 SRD5A3Q9H8P0 318 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A10PA6NDY2 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A18PA6NE21 464 aa14.35□□□□□ -0.11
PCDHA1-203ENST00000504120 FAM90A16PA6NEW6 464 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms