RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 IL34Q6ZMJ4 242 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 ZNF429Q86V71 674 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 HPSE2Q8WWQ2 592 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 ADGRG7Q96K78 797 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 CLN8Q9UBY8 286 aa11.52□□□□□ -0.56
GPC1-209ENST00000495100 IGHV3OR15-7A0A075B7D8 119 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 hCG_38984A0A1B0GV85 526 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 ZNF705GA8MUZ8 300 aaPredicted RBP11.52□□□□□ -0.57
GPC1-209ENST00000495100 RAC2P15153 192 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 RHEBQ15382 184 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 OR8G1Q15617 311 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 LHFPL1Q86WI0 220 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 CCDC54Q8NEL0 328 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 DMBX1Q8NFW5 382 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 M1APQ8TC57 530 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 TMEM54Q969K7 222 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 APOBEC3DQ96AK3 386 aaPredicted RBP11.52□□□□□ -0.57
GPC1-209ENST00000495100 SLC25A31Q9H0C2 315 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 PRO1933Q9H354 126 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 WASF3Q9UPY6 502 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 V9GYS6 101 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 DMXL1Q9Y485 3027 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 DBX1A6NMT0 343 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 CD55P08174 381 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.57
GPC1-209ENST00000495100 ZNF528Q3MIS6 628 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 FAM201AQ5SY85 155 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 CARFQ8N187 725 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 OR52L2PQ8NGH6 319 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 KCNE4Q8WWG9 221 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 CHRNA10Q9GZZ6 450 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 PCED1AQ9H1Q7 454 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 OR2D2Q9H210 308 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
GPC1-209ENST00000495100 TMEM131Q92545 1883 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 HEXAP06865 529 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 CD46P15529 392 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 UQCC3Q6UW78 93 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 LHX4Q969G2 390 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 COL12A1Q99715 3063 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 LYPD6Q86Y78 171 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 USB1Q9BQ65 265 aaKnown RBP11.51□□□□□ -0.57
GPC1-209ENST00000495100 FAM173AQ9BQD7 235 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 SLC35B3Q9H1N7 401 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 CLEC18AA5D8T8 446 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 OR5H1A6NKK0 313 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 SPINK4O60575 86 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 CRYAAP02489 173 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
GPC1-209ENST00000495100 C10orf128Q5T292 105 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 ZNF709Q8N972 641 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 CLEC18CQ8NCF0 446 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 WDR54Q9H977 334 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 CACFD1Q9UGQ2 172 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 ZNF107Q9UII5 783 aaPredicted RBP11.51□□□□□ -0.57
GPC1-209ENST00000495100 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
GPC1-209ENST00000495100 PSG11Q9UQ72 335 aa11.51□□□□□ -0.57
GPC1-209ENST00000495100 KIR2DS1A0A191URI9 304 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 RBFOX3A6NFN3 312 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 H3BQ15 152 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 IFNA10P01566 189 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 KIR2DS4P43632 304 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 SSPNQ14714 243 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 KIR2DS1Q14954 304 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 RTL6Q6ICC9 239 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 OR1L1Q8NH94 360 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 TMEM171Q8WVE6 324 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 PLEKHF2Q9H8W4 249 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 TGIF2-C20orf24A0A0A6YYL0 155 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 A0A0G2JRQ6 117 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 MEOX2P50222 304 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 SSTP61278 116 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 RND3P61587 244 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 DLK1P80370 383 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 PRB3Q04118 309 aaPredicted RBP11.5□□□□□ -0.57
GPC1-209ENST00000495100 SLC25A40Q8TBP6 338 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 HIST1H2BAQ96A08 127 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 GLRX2Q9NS18 164 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 TMED3Q9Y3Q3 217 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 KALRNO60229 2985 aa11.5□□□□□ -0.57
GPC1-209ENST00000495100 TRGV5A0A0B4J1U4 118 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 A0A1W2PPQ1 181 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 ST8SIA5O15466 376 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 TPPPO94811 219 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 GNG3P63215 75 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 Q3ZCU0 254 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 OIT3Q8WWZ8 545 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 C9orf172C9J069 976 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 IFNA4P05014 189 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 P2RY1P47900 373 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 NKX6-1P78426 367 aaPredicted RBP11.49□□□□□ -0.57
GPC1-209ENST00000495100 DEFB109BQ30KR1 87 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 OR10D4PQ8NGN7 298 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 GPR146Q96CH1 333 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 RAB39BQ96DA2 213 aa11.49□□□□□ -0.57
GPC1-209ENST00000495100 KLRC4-KLRK1H3BQV0 150 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms