RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 STX19Q8N4C7 294 aa12.55□□□□□ -0.4
PDE6D-205ENST00000486044 OR10K1Q8NGX5 313 aa12.55□□□□□ -0.4
PDE6D-205ENST00000486044 OR5AK2Q8NH90 309 aa12.55□□□□□ -0.4
PDE6D-205ENST00000486044 NEK7Q8TDX7 302 aa12.55□□□□□ -0.4
PDE6D-205ENST00000486044 TSEN15Q8WW01 171 aaKnown RBP12.55□□□□□ -0.4
PDE6D-205ENST00000486044 ERGIC3Q9Y282 383 aa12.55□□□□□ -0.4
PDE6D-205ENST00000486044 WSB1Q9Y6I7 421 aa12.55□□□□□ -0.4
PDE6D-205ENST00000486044 IGHV3-43A0A0B4J1X8 118 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 IGLV1-40P01703 118 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 IGHV3-43DP0DP04 118 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 SLC2A2P11168 524 aaPredicted RBP12.54□□□□□ -0.4
PDE6D-205ENST00000486044 RAB9AP51151 201 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 MRPL28Q13084 256 aaKnown RBP12.54□□□□□ -0.4
PDE6D-205ENST00000486044 MMDQ15546 238 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 TMEM30BQ3MIR4 351 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 NHLRC3Q5JS37 347 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 MEDAGQ5VYS4 303 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 STEAP3Q658P3 488 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 ASCL4Q6XD76 172 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 OR52N1Q8NH53 320 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 CCDC107Q8WV48 283 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 S100A13Q99584 98 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 METTL9Q9H1A3 318 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 PAK1IP1Q9NWT1 392 aaPredicted RBP12.54□□□□□ -0.4
PDE6D-205ENST00000486044 GNG12Q9UBI6 72 aa12.54□□□□□ -0.4
PDE6D-205ENST00000486044 TRAV41A0A0B4J266 112 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 FAM90A10PA6NDY2 464 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 G3V318 75 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 AIPO00170 330 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 LDLRAD4O15165 306 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 SPINT2O43291 252 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 FCGR1AP12314 374 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 MYF6P23409 242 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 RBM11P57052 281 aaKnown RBP12.53□□□□□ -0.4
PDE6D-205ENST00000486044 SLC25A30Q5SVS4 291 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 ATAD3CQ5T2N8 411 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 AMIGO2Q86SJ2 522 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 SYS1Q8N2H4 156 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 UBALD1Q8TB05 177 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
PDE6D-205ENST00000486044 TM2D3Q9BRN9 247 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 PARP11Q9NR21 331 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 IL36GQ9NZH8 169 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 ING4Q9UNL4 249 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 MRPS28Q9Y2Q9 187 aaKnown RBP12.53□□□□□ -0.4
PDE6D-205ENST00000486044 AP4S1Q9Y587 144 aa12.53□□□□□ -0.4
PDE6D-205ENST00000486044 EPPK1P58107 5090 aaKnown RBP12.52□□□□□ -0.4
PDE6D-205ENST00000486044 LINC01619G3V211 115 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 LANCL1O43813 399 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 CDRT1O95170 752 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 HLA-DRB1P01911 266 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 MT-ND4P03905 459 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 OR8U9P0C7N5 309 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 MPV17LQ2QL34 196 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 FAM53AQ6NSI3 398 aaPredicted RBP12.52□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF529Q6P280 563 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 OR4C12Q96R67 309 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF251Q9BRH9 671 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 ALG8Q9BVK2 526 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 JAM3Q9BX67 310 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 TRAPPC2LQ9UL33 140 aa12.52□□□□□ -0.41
PDE6D-205ENST00000486044 EXOGQ9Y2C4 368 aaKnown RBP12.52□□□□□ -0.41
PDE6D-205ENST00000486044 TRIM64CA6NLI5 447 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 GEMIN2O14893 280 aaKnown RBP12.51□□□□□ -0.41
PDE6D-205ENST00000486044 ATP6V0E1O15342 81 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 SLC31A2O15432 143 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
PDE6D-205ENST00000486044 CD2P06729 351 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 VHLP40337 213 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 ACTBP60709 375 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 SNRPGP62308 76 aaKnown RBP12.51□□□□□ -0.41
PDE6D-205ENST00000486044 LSAMPQ13449 338 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 SRSF7Q16629 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDE6D-205ENST00000486044 CT45A1Q5HYN5 189 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 LIN54Q6MZP7 749 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 ACSM6Q6P461 480 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 LHFPL3Q86UP9 236 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF439Q8NDP4 499 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 OR51A2Q8NGJ7 313 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 CT45A3Q8NHU0 189 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 PDCD1LG2Q9BQ51 273 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 SPACA1Q9HBV2 294 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF581Q9P0T4 197 aa12.51□□□□□ -0.41
PDE6D-205ENST00000486044 NKX1-2Q9UD57 310 aaPredicted RBP12.51□□□□□ -0.41
PDE6D-205ENST00000486044 DNAH7Q8WXX0 4024 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF93P35789 620 aaPredicted RBP12.5□□□□□ -0.41
PDE6D-205ENST00000486044 VEGFCP49767 419 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 ZNF134P52741 427 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 GBX2P52951 348 aaPredicted RBP12.5□□□□□ -0.41
PDE6D-205ENST00000486044 SLURP1P55000 103 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 PPP3R1P63098 170 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 PITPNAQ00169 270 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 MINDY2Q8NBR6 621 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 ARPC1AQ92747 370 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 TOLLIPQ9H0E2 274 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 CST11Q9H112 138 aa12.5□□□□□ -0.41
PDE6D-205ENST00000486044 ISG20L2Q9H9L3 353 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms