RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 PCGF1Q9BSM1 259 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 ANGPTL4Q9BY76 406 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 UCK1Q9HA47 277 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 PATZ1Q9HBE1 687 aaKnown RBP10.92□□□□□ -0.66
VPS52-218ENST00000482399 TMEM38BQ9NVV0 291 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 ANAPC10Q9UM13 185 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 MRPS17Q9Y2R5 130 aaKnown RBP10.92□□□□□ -0.66
VPS52-218ENST00000482399 CHCHD2Q9Y6H1 151 aaPredicted RBP10.92□□□□□ -0.66
VPS52-218ENST00000482399 A0A0G2JMM0 328 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 A0A1W2PPB8 328 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 A0A1W2PQM1 296 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 A0A1W2PRS3 328 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 GJE1A6NN92 205 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 KIR3DP1A8MWS1 328 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 IGHV3-13P01766 116 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 IGHV3-7P01780 117 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 BCL2P10415 239 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 FAM3BP58499 235 aaPredicted RBP10.92□□□□□ -0.66
VPS52-218ENST00000482399 PCBD1P61457 104 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 ZNF705AQ6ZN79 300 aaPredicted RBP10.92□□□□□ -0.66
VPS52-218ENST00000482399 CXorf67Q86X51 503 aaPredicted RBP10.92□□□□□ -0.66
VPS52-218ENST00000482399 OR4D5Q8NGN0 318 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 CLDND2Q8NHS1 167 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 OR2H1Q9GZK4 316 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 OR6C6A6NF89 314 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 NGFP01138 241 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 GRPP07492 148 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 STARD6P59095 220 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 C16orf82Q7Z2V1 217 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 FAM185AQ8N0U4 392 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 OR10A7Q8NGE5 316 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 C14orf144Q96I85 54 aa10.92□□□□□ -0.66
VPS52-218ENST00000482399 LTBP2Q14767 1821 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 DEGS1O15121 323 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 PPIHO43447 177 aaKnown RBP10.91□□□□□ -0.66
VPS52-218ENST00000482399 SYNGR2O43760 224 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 HSPB1P04792 205 aaKnown RBP10.91□□□□□ -0.66
VPS52-218ENST00000482399 LIFP15018 202 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 CA6P23280 308 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 GALR1P47211 349 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 PSMB3P49720 205 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 C3AR1Q16581 482 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 SMRP1Q8NCR6 262 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 CLDN23Q96B33 292 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 HINT2Q9BX68 163 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 TWSG1Q9GZX9 223 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 MSL2Q9HCI7 577 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 OR1A1Q9P1Q5 309 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 PTPRSQ13332 1948 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 A0A0G2JRQ6 117 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 IGHV5-10-1A0A0J9YXX1 117 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 ARGFXA6NJG6 315 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 ANKRD30BLA7E2S9 258 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 RFPL3SP0C7P2 107 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 HIST1H1BP16401 226 aaKnown RBP10.91□□□□□ -0.66
VPS52-218ENST00000482399 SELEP16581 610 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 RAC1P63000 192 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 ZDHHC23Q8IYP9 409 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 ABHD5Q8WTS1 349 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 PRSS50Q9UI38 385 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 PGLYRP1O75594 196 aaPredicted RBP10.91□□□□□ -0.66
VPS52-218ENST00000482399 CBR3O75828 277 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 SERPINA7P05543 415 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 IL2RGP31785 369 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
VPS52-218ENST00000482399 PLGLB1Q02325 96 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 IL24Q13007 206 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 BSXQ3C1V8 233 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 TMEM211Q6ICI0 200 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 TGIF2LXQ8IUE1 241 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 MALSU1Q96EH3 234 aa10.91□□□□□ -0.66
VPS52-218ENST00000482399 EML6Q6ZMW3 1958 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 PDGFBP01127 241 aaPredicted RBP10.9□□□□□ -0.66
VPS52-218ENST00000482399 F2RP25116 425 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 APLNRP35414 380 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 PKIAP61925 76 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 EIF3IQ13347 325 aaKnown RBP10.9□□□□□ -0.66
VPS52-218ENST00000482399 TMEM241Q24JQ0 296 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 LINC00696Q6ZRV3 163 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 RFESDQ8TAC1 157 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 RCC1LQ96I51 464 aaKnown RBP10.9□□□□□ -0.66
VPS52-218ENST00000482399 ELOVL1Q9BW60 279 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 ZNF576Q9H609 170 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 PISDQ9UG56 409 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 ZNF320A2RRD8 509 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 RPL36A-HNRNPH2H7BZ11 118 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 ZIC3O60481 467 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 FOLR3P41439 243 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 ZIC4Q8N9L1 334 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 OR4C12Q96R67 309 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 WNT5BQ9H1J7 359 aa10.9□□□□□ -0.66
VPS52-218ENST00000482399 FREM2Q5SZK8 3169 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 SYNGR3O43761 229 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 SPINK4O60575 86 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 FGF7P21781 194 aa10.89□□□□□ -0.67
VPS52-218ENST00000482399 MDH2P40926 338 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms