RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PAX2Q02962 417 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 FZD5Q13467 585 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 CEACAM7Q14002 265 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TMEM91Q6ZNR0 172 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ANKRD37Q7Z713 158 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 OR2Y1Q8NGV0 311 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ZPLD1Q8TCW7 415 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ANAPC13Q9BS18 74 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TRGV11A0A075B6L2 103 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 KIR2DL5BA0A0G2JN68 375 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 KIR2DL5BA0A0G2JPC4 375 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 C21orf140B9A014 251 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ATXN7O15265 892 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 ZNHIT1O43257 154 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 CRLF1O75462 422 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 GAPDHP04406 335 aaKnown RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 HTN1P15515 57 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 IFI27P40305 119 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 ZNF774Q6NX45 483 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TP53INP2Q8IXH6 220 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 KIR2DL5AQ8N109 375 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 LYG1Q8N1E2 194 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ST6GAL2Q96JF0 529 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 MEGF10Q96KG7 1140 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 GSX2Q9BZM3 304 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 SLC25A22Q9H936 323 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 SLC6A13Q9NSD5 602 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TMEM106BQ9NUM4 274 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 PHIPQ8WWQ0 1821 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 A0A087WWV3 80 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ZNF253O75346 499 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 KLKB1P03952 638 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ARG1P05089 322 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 UBE2BP63146 152 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 NNATQ16517 81 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 C9orf40Q8IXQ3 194 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 SYS1Q8N2H4 156 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 MZB1Q8WU39 189 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 SPACA9Q96E40 222 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 MUS81Q96NY9 551 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 OR51M1Q9H341 326 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 SHISA7A6NL88 538 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 RAB29O14966 203 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 AMY1AP04745 511 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 DNM1P46Q6ZS02 220 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 HTR3DQ70Z44 454 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 OR1P1Q8NH06 330 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 OR1F12Q8NHA8 337 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 CNIH3Q8TBE1 160 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TSKUQ8WUA8 353 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ISOC2Q96AB3 205 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 PLA2G12AQ9BZM1 189 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 MARCH4Q9P2E8 410 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 CLDN16Q9Y5I7 305 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 WSB1Q9Y6I7 421 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ABCA1O95477 2261 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 IGHA1P01876 353 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 IGHA2P01877 340 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 C1QBP02746 253 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TCRBP04435 133 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 TMIGD3P0DMS9 266 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 CD22P20273 847 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ANOS1P23352 680 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 SSPNQ14714 243 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 RASL11AQ6T310 242 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 PQLC2Q6ZP29 291 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 LINC00696Q6ZRV3 163 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 C16orf52Q8NHV5 167 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 EMID1Q96A84 441 aaPredicted RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 NEURL3Q96EH8 262 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 QTRT1Q9BXR0 403 aaKnown RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 WNT5BQ9H1J7 359 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 HS3ST2Q9Y278 367 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 A0A087X0M5 115 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 A0A1B0GX30 115 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 C7orf71A4D174 169 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ALOX5APP20292 161 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 RPS24P62847 133 aaKnown RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 CDKN3Q16667 212 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 ATOH7Q8N100 152 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 OR8B12Q8NGG6 310 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 OR9G4Q8NGQ1 327 aa4.8□□□□□ -1.64
USF3-202ENST00000478658 APOBEC3GQ9HC16 384 aaKnown RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 RBBP6Q7Z6E9 1792 aaKnown RBP4.8□□□□□ -1.64
USF3-202ENST00000478658 TRAV9-1A0A075B6T8 112 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 TRAV1-2A0A0B4J238 106 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 TRAV8-6A0A0B4J262 113 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 CGB1A6NKQ9 187 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 HYAL3O43820 417 aaPredicted RBP4.79□□□□□ -1.64
USF3-202ENST00000478658 NAAAQ02083 359 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 PIP5KL1Q5T9C9 394 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 OR10G4Q8NGN3 311 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 OR10G9Q8NGN4 311 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 OR10G7Q8NGN6 311 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SCAMP5Q8TAC9 235 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 FBLIM1Q8WUP2 373 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 RNF133Q8WVZ7 376 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 SNX22Q96L94 193 aa4.79□□□□□ -1.64
USF3-202ENST00000478658 HS3ST3B1Q9Y662 390 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms