RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CYB561P49447 251 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TTPAP49638 278 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 VEGFCP49767 419 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 SULT1A1P50225 295 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 SULT1A2P50226 295 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ERFP50548 548 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 RAB38P57729 211 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF121P58317 390 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 C1QTNF8P60827 252 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PSME3P61289 254 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ERVS71-1P61550 626 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 LSM6P62312 80 aaKnown RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 RPS24P62847 133 aaKnown RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC35A1P78382 337 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 POU6F1Q14863 301 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 HERPUD1Q15011 391 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PON3Q15166 354 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CEACAM21Q3KPI0 293 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TCTEX1D4Q5JR98 221 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC25A30Q5SVS4 291 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 SYT6Q5T7P8 510 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 FHL5Q5TD97 284 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 HIST2H3PS2Q5TEC6 136 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF544Q6NX49 715 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TNFAIP8L2Q6P589 184 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CD200R1LQ6Q8B3 271 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 Q6ZT83 130 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 NIT1Q86X76 327 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PRSS58Q8IYP2 241 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 LGI3Q8N145 548 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF567Q8N184 647 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TMEM86AQ8N2M4 240 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ARRDC1Q8N5I2 433 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 DCAF4L2Q8NA75 395 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 C20orf203Q8NBC4 194 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 MAPK1IP1LQ8NDC0 245 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PXT1Q8NFP0 134 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 OR51G1Q8NGK1 321 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 OR10J6PQ8NGY7 276 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 WFDC5Q8TCV5 224 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 RNF138Q8WVD3 245 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 KCTD4Q8WVF5 259 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CYGBQ8WWM9 190 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 HBEGFQ99075 208 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PKMYT1Q99640 499 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 NIPSNAP1Q9BPW8 284 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 OSBPL11Q9BXB4 747 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CHRNA10Q9GZZ6 450 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TAS2R7Q9NYW3 318 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 IL17CQ9P0M4 197 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 VPS29Q9UBQ0 182 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 OR12D3Q9UGF7 316 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 FBXO5Q9UKT4 447 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC7A11Q9UPY5 501 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 TRAPPC4Q9Y296 219 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 MMACHCQ9Y4U1 282 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 NEUROG3Q9Y4Z2 214 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 KCNE3Q9Y6H6 103 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 CEP290O15078 2479 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 PLXNA2O75051 1894 aa2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF106Q9H2Y7 1883 aaKnown RBP2.71□□□□□ -1.98
HMGB1P25-201ENST00000468402 NINQ8N4C6 2090 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 A0A0D9SEW6 157 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 EXOC1LA0A1B0GW35 172 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC5A10A0PJK1 596 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 FUOMA2VDF0 154 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 C21orf140B9A014 251 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 TRIM49D1C9J1S8 452 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 APOC4-APOC2K7ER74 178 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 PHYHO14832 338 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 ERI3O43414 337 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 RAD1O60671 282 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SUPT3HO75486 399 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 OR2B3O76000 313 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 AQP8O94778 261 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 MOSP00540 346 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 IFNA21P01568 189 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 APOC2P02655 101 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 MRPL3P09001 348 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SNRPAP09012 282 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 HIST1H1EP10412 219 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 AKR1C4P17516 323 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 GABRG2P18507 467 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 RCC1P18754 421 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 LOXP28300 417 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SSTR5P35346 364 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 PPICP45877 212 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 GALR1P47211 349 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 PSMB2P49721 201 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 CDK9P50750 372 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 BTN3A2P78410 334 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SLC7A9P82251 487 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 IL5RAQ01344 420 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 KRR1Q13601 381 aaKnown RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 IHHQ14623 411 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 GINS1Q14691 196 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 SMCO1Q147U7 214 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 ZNF630Q2M218 657 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 HLA-DRB5Q30154 266 aa2.7□□□□□ -1.98
HMGB1P25-201ENST00000468402 CASC10Q5T4H9 136 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms