RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 OR5AK2Q8NH90 309 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 LGALS12Q96DT0 336 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 CENPNQ96H22 339 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-209ENST00000463631 PDCD1LG2Q9BQ51 273 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 FAM192AQ9GZU8 254 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 GNB4Q9HAV0 340 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 ISYNA1Q9NPH2 558 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF107Q9UII5 783 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-209ENST00000463631 VSIG4Q9Y279 399 aa13.43□□□□□ -0.26
HMGN1-209ENST00000463631 HTR3BO95264 441 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 FRMD6-AS1P0C7T7 363 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 MPV17LQ2QL34 196 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 ZNF497Q6ZNH5 498 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 OR52N1Q8NH53 320 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 CITED4Q96RK1 184 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 JAM3Q9BX67 310 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 KLK15Q9H2R5 256 aa13.42□□□□□ -0.26
HMGN1-209ENST00000463631 ISG20L2Q9H9L3 353 aaKnown RBP13.42□□□□□ -0.26
HMGN1-209ENST00000463631 FAM90A10PA6NDY2 464 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 GEMIN2O14893 280 aaKnown RBP13.41□□□□□ -0.26
HMGN1-209ENST00000463631 SLC31A2O15432 143 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 GNB1P62873 340 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 LSAMPQ13449 338 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 STEAP3Q658P3 488 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 FAM53AQ6NSI3 398 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-209ENST00000463631 TMEM65Q6PI78 240 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 SATL1Q86VE3 508 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 UBALD1Q8TB05 177 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 RGP1Q92546 391 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-209ENST00000463631 PALMDQ9NP74 551 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 RAB9BQ9NP90 201 aa13.41□□□□□ -0.26
HMGN1-209ENST00000463631 IGHV3-43A0A0B4J1X8 118 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 E9PI62 339 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 OVOL1O14753 267 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 LANCL1O43813 399 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 CDRT1O95170 752 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 MT-ND4P03905 459 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 ALPLP05186 524 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 IGHV3-43DP0DP04 118 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 SLC2A2P11168 524 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-209ENST00000463631 MMDQ15546 238 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 LHFPL3Q86UP9 236 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 METTL9Q9H1A3 318 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 OR51J1Q9H342 316 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 PAK1IP1Q9NWT1 392 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-209ENST00000463631 ERVK13-1Q9NX77 482 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 TAS2R4Q9NYW5 299 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 BIRC6Q9NR09 4857 aa13.4□□□□□ -0.26
HMGN1-209ENST00000463631 C12orf77C9JDV5 145 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 AIPO00170 330 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 SPINT2O43291 252 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 ZNF780AO75290 641 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-209ENST00000463631 CSTBP04080 98 aaKnown RBP13.39□□□□□ -0.27
HMGN1-209ENST00000463631 CD2P06729 351 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 MYF6P23409 242 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 ZNF134P52741 427 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 DOC2BQ14184 412 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 CT45A1Q5HYN5 189 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 OVCH2Q7RTZ1 564 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 GAPTQ8N292 157 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 CT45A3Q8NHU0 189 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 CCDC107Q8WV48 283 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 DCUN1D4Q92564 292 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 ZMAT4Q9H898 229 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 TMEM138Q9NPI0 162 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 RCC2Q9P258 522 aaKnown RBP13.39□□□□□ -0.27
HMGN1-209ENST00000463631 GNG12Q9UBI6 72 aa13.39□□□□□ -0.27
HMGN1-209ENST00000463631 SAC3D1A6NKF1 404 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 G3V318 75 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 ATP6V0E1O15342 81 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 SAP30O75446 220 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 FADS2O95864 444 aaKnown RBP13.38□□□□□ -0.27
HMGN1-209ENST00000463631 SPNP16150 400 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 GABRB1P18505 474 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 ZNF93P35789 620 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-209ENST00000463631 RAB9AP51151 201 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 STX19Q8N4C7 294 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 MINDY2Q8NBR6 621 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 GPR148Q8TDV2 347 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 NEK7Q8TDX7 302 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 TM2D3Q9BRN9 247 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 SPACA1Q9HBV2 294 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 GMPPBQ9Y5P6 360 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 WSB1Q9Y6I7 421 aa13.38□□□□□ -0.27
HMGN1-209ENST00000463631 TRAV41A0A0B4J266 112 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 GP9P14770 177 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 SERPINA2P20848 420 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 SOX2P48431 317 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 GBX2P52951 348 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-209ENST00000463631 ACTBP60709 375 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 C19orf54Q5BKX5 351 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 ATAD3CQ5T2N8 411 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 C6orf183Q5T699 404 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 DDI2Q5TDH0 399 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 C1orf146Q5VVC0 180 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 TRAT1Q6PIZ9 186 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 TMEM106AQ96A25 262 aa13.37□□□□□ -0.27
HMGN1-209ENST00000463631 RBMXL1Q96E39 390 aaKnown RBP13.37□□□□□ -0.27
HMGN1-209ENST00000463631 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms