RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 PEX16Q9Y5Y5 336 aa4.33□□□□□ -1.72
HMGB1P4-201ENST00000455362 TACC2O95359 2948 aa4.33□□□□□ -1.72
HMGB1P4-201ENST00000455362 HRNRQ86YZ3 2850 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P4-201ENST00000455362 SPG11Q96JI7 2443 aa4.33□□□□□ -1.72
HMGB1P4-201ENST00000455362 CACNA1DQ01668 2161 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 TRAV6A0A075B6T7 132 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PPIAL4EA0A075B759 164 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 TRAV25A0A0B4J276 109 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 IGKV1-9A0A0C4DH69 117 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 ZNF816-ZNF321PA0A0X1KG74 233 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 CD300LBA8K4G0 201 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 OVOL3O00110 214 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 SLC17A2O00624 439 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 CCSO14618 274 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 NBR2O15453 112 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 RGS5O15539 181 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 SULT1B1O43704 296 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GMDSO60547 372 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 HPGDSO60760 199 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GAGE7O76087 117 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 NRASP01111 189 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 APOA1P02647 267 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 ALDOBP05062 364 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 ERCC1P07992 297 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GAGE12FP0CL80 117 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GAGE12GP0CL81 117 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GAGE12IP0CL82 117 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PPIAL4FP0DN26 164 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PRF1P14222 555 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 TUBG1P23258 451 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 SSTR2P30874 369 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 CALCRP30988 508 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 CCKARP32238 428 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 ETV6P41212 452 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 EVX1P49640 407 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 RAB9AP51151 201 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PPP1CBP62140 327 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PPP3R1P63098 170 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GAGE1Q13065 139 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GAGE4Q13068 117 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 RBM39Q14498 530 aaKnown RBP4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 RAB11BQ15907 218 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 C6orf226Q5I0X4 101 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 CLVS2Q5SYC1 327 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 HES5Q5TA89 166 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GLT8D1Q68CQ7 371 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 FBXW12Q6X9E4 464 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 SSX9Q7RTT3 188 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 SSX8Q7RTT4 187 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 MRPL21Q7Z2W9 205 aaKnown RBP4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 C1orf174Q8IYL3 243 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 OR4D5Q8NGN0 318 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 OR13C9Q8NGT0 318 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 OR5H6Q8NGV6 325 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 GPX8Q8TED1 209 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 SSC4DQ8WTU2 575 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 S100ZQ8WXG8 99 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 RNASE6Q93091 150 aaKnown RBP4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 CMBLQ96DG6 245 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 C8orf49Q96NF6 230 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 WFIKKN1Q96NZ8 548 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 SOSTQ9BQB4 213 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 KRTAP4-11Q9BYQ6 195 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 CHST5Q9GZS9 411 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 OR51B6Q9H340 312 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PLEKHA1Q9HB21 404 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PLGRKTQ9HBL7 147 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 TUBG2Q9NRH3 451 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 ABRACLQ9P1F3 81 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 OR5V1Q9UGF6 321 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PAIP2BQ9ULR5 123 aaKnown RBP4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 RHBDD3Q9Y3P4 386 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 PPIAL4AQ9Y536 164 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 MAP1AP78559 2803 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 DCHS2Q6V1P9 2916 aa4.32□□□□□ -1.72
HMGB1P4-201ENST00000455362 ARFGEF3Q5TH69 2177 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 NKX2-6A6NCS4 301 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 DPRXA6NFQ7 191 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 GGT3PA6NGU5 568 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 B8ZZF3 427 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 CLDN25C9JDP6 229 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 M0R1B8 84 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 NXPH2O95156 264 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 CST4P01036 141 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 CRYAAP02489 173 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 CRYGBP07316 175 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 ELK1P19419 428 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 HTR2CP28335 458 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 ZNF93P35789 620 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 MPV17P39210 176 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 UQCRFS1P47985 274 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 FUT6P51993 359 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 CLDN12P56749 244 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 ERVS71-1P61550 626 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 ZNF45Q02386 682 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 PSG7Q13046 419 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 KLF5Q13887 457 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 ZNF846Q147U1 533 aa4.31□□□□□ -1.72
HMGB1P4-201ENST00000455362 KISS1Q15726 138 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms