RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 HRASP01112 189 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 RUNX1Q01196 453 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 ATRAIDQ6UW56 229 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 PAQR4Q8N4S7 273 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-206ENST00000445265 SMOC1Q9H4F8 434 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 RNF122Q9H9V4 155 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 Q9N2K0 584 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 DEFB108AA8MXU0 73 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 SPINK2P20155 84 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 HNF1AP20823 631 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 FAM166AQ6J272 317 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 SCCPDHQ8NBX0 429 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 OR52M1Q8NGK5 317 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 PLPPR2Q96GM1 343 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 POM121L2Q96KW2 1035 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 SDK2Q58EX2 2172 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 RALGAPA1Q6GYQ0 2036 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 AQP7O14520 342 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 HSPB1P04792 205 aaKnown RBP14.39□□□□□ -0.11
TCOF1-206ENST00000445265 LRRC29Q8WV35 223 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 GDF15Q99988 308 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 SRXN1Q9BYN0 137 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 WNT5BQ9H1J7 359 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 MIOXQ9UGB7 285 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 RAB7AP51149 207 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 HIKESHIQ53FT3 197 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 CXorf66Q5JRM2 361 aaPredicted RBP14.39□□□□□ -0.11
TCOF1-206ENST00000445265 C17orf78Q8N4C9 275 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 OR5D13Q8NGL4 314 aa14.39□□□□□ -0.11
TCOF1-206ENST00000445265 C20orf202A1L168 122 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 DCAF10Q5QP82 559 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 NSUN5P2Q63ZY6 315 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 CYB561D1Q8N8Q1 229 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 NAT2P11245 290 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 PAX6P26367 422 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 C3AR1Q16581 482 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 TRAPPC1Q9Y5R8 145 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 PTPRZ1P23471 2315 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-206ENST00000445265 BCL2P10415 239 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 UBE2G1P62253 170 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 OR10A7Q8NGE5 316 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 TUBD1Q9UJT1 453 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 TRAV39A0A0B4J263 110 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 XKRY2A2RUG3 117 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 DNASE2O00115 360 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-206ENST00000445265 KIR2DS2P43631 304 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 KDF1Q8NAX2 398 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-206ENST00000445265 OR2T10Q8NGZ9 312 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 IL22RA2Q969J5 263 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 ZNF488Q96MN9 340 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 RNF126Q9BV68 326 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 ZNF586Q9NXT0 402 aa14.38□□□□□ -0.11
TCOF1-206ENST00000445265 IGHV3-43A0A0B4J1X8 118 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 IGHV3-43DP0DP04 118 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 CCL1P22362 96 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 SMIM8Q96KF7 97 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 LDLRAD4O15165 306 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 COX5BP10606 129 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 ANAPC16Q96DE5 110 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 TINAGQ9UJW2 476 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 CTXND1A0A1B0GTU2 59 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 TMEM210A6NLX4 147 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 ID4P47928 161 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 FADS6Q8N9I5 356 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 TTTY12Q9BZ98 90 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 ASXL3Q9C0F0 2248 aa14.37□□□□□ -0.11
TCOF1-206ENST00000445265 IGLV3-32A0A0A0MS00 114 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 F8VVB4 439 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 F8VWA3 439 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 SELENOHQ8IZQ5 122 aaKnown RBP14.36□□□□□ -0.11
TCOF1-206ENST00000445265 OR10X1Q8NGY0 326 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 MARS2Q96GW9 593 aaKnown RBP14.36□□□□□ -0.11
TCOF1-206ENST00000445265 ZXDAP98168 799 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 IQCJQ1A5X6 159 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 MDP1Q86V88 176 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 CMTM2Q8TAZ6 248 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 R3HDM4Q96D70 268 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 PPP1CCP36873 323 aaKnown RBP14.36□□□□□ -0.11
TCOF1-206ENST00000445265 BPIFB3P59826 476 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 RHOBP62745 196 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 PLAURQ03405 335 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 DEFB109BQ30KR1 87 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 PHYHD1Q5SRE7 291 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 SLC35E3Q7Z769 313 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 SPRY3O43610 288 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 PGLYRP1O75594 196 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-206ENST00000445265 CLPSP04118 112 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 CHRNA7P36544 502 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 FAM89BQ8N5H3 189 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 SIGLECL1Q8N7X8 197 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 ZNF439Q8NDP4 499 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 HSD17B10Q99714 261 aaKnown RBP14.36□□□□□ -0.11
TCOF1-206ENST00000445265 OR6C3Q9NZP0 311 aa14.36□□□□□ -0.11
TCOF1-206ENST00000445265 GZMHP20718 246 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 PILRBQ9UKJ0 227 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 PRRG2O14669 202 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 GABRA6Q16445 453 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 INO80CQ6PI98 192 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-206ENST00000445265 DBX2Q6ZNG2 339 aa14.35□□□□□ -0.11
TCOF1-206ENST00000445265 OR10S1Q8NGN2 331 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms