RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 PQLC1Q8N2U9 271 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 Q8N9W7 124 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 TMEM104Q8NE00 496 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 GHSRQ92847 366 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 MRPS24Q96EL2 167 aaKnown RBP16.32■□□□□ 0.2
CPNE1-219ENST00000440240 RDH12Q96NR8 316 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 RASL11BQ9BPW5 248 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 DCLRE1BQ9H816 532 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 DNAH9Q9NYC9 4486 aa16.32■□□□□ 0.2
CPNE1-219ENST00000440240 SIRT4Q9Y6E7 314 aaPredicted RBP16.32■□□□□ 0.2
CPNE1-219ENST00000440240 MCRIP1C9JLW8 97 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 SPINT2O43291 252 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 TXNL1O43396 289 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 RAMP3O60896 148 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 IGFBP3P17936 291 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-219ENST00000440240 DGCR2P98153 550 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 GPR50Q13585 617 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 TMEM30BQ3MIR4 351 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 UBALD1Q8TB05 177 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 PLSCR3Q9NRY6 295 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 CHCHD3Q9NX63 227 aaKnown RBP16.31■□□□□ 0.2
CPNE1-219ENST00000440240 TRAPPC2LQ9UL33 140 aa16.31■□□□□ 0.2
CPNE1-219ENST00000440240 DIMT1Q9UNQ2 313 aaKnown RBP16.31■□□□□ 0.2
CPNE1-219ENST00000440240 EXOSC1Q9Y3B2 195 aaKnown RBP16.31■□□□□ 0.2
CPNE1-219ENST00000440240 KMT2CQ8NEZ4 4911 aaKnown RBP16.31■□□□□ 0.2
CPNE1-219ENST00000440240 IGHV3-43A0A0B4J1X8 118 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 ELANEP08246 267 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 IGHV3-43DP0DP04 118 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 CDX1P47902 265 aaPredicted RBP16.3■□□□□ 0.2
CPNE1-219ENST00000440240 FOXE3Q13461 319 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 MED21Q13503 144 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 KIR2DS1Q14954 304 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 STEAP3Q658P3 488 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 OR8U1Q8NH10 309 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 ORAI1Q96D31 301 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 RAX2Q96IS3 184 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 S1PR3Q99500 378 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 SMPD3Q9NY59 655 aaPredicted RBP16.3■□□□□ 0.2
CPNE1-219ENST00000440240 GNG12Q9UBI6 72 aa16.3■□□□□ 0.2
CPNE1-219ENST00000440240 TRBV5-5A0A0J9YX44 114 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 A0A1W2PP11 408 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 RPLP1P05386 114 aaKnown RBP16.29■□□□□ 0.2
CPNE1-219ENST00000440240 ZNF137PP52743 207 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 RAB25P57735 213 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 Q499Y3 187 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 YIF1BQ5BJH7 314 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 C6orf183Q5T699 404 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 SYT6Q5T7P8 510 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-219ENST00000440240 DMKNQ6E0U4 476 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-219ENST00000440240 SLC25A48Q6ZT89 311 aaKnown RBP16.29■□□□□ 0.2
CPNE1-219ENST00000440240 RNF152Q8N8N0 203 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 DUX3Q96PT4 197 aa16.29■□□□□ 0.2
CPNE1-219ENST00000440240 RCC2Q9P258 522 aaKnown RBP16.29■□□□□ 0.2
CPNE1-219ENST00000440240 C12orf77C9JDV5 145 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 CA11O75493 328 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 SOX6P35712 828 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 TRAT1Q6PIZ9 186 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 CDH26Q8IXH8 852 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 OR5M8Q8NGP6 311 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 OR13C5Q8NGS8 318 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 TMEM80Q96HE8 168 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 WWC2-AS2Q96NR7 200 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 ETAA1Q9NY74 926 aa16.28■□□□□ 0.2
CPNE1-219ENST00000440240 MRPS28Q9Y2Q9 187 aaKnown RBP16.28■□□□□ 0.2
CPNE1-219ENST00000440240 ZNF736B4DX44 427 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-219ENST00000440240 LALBAP00709 142 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 IGHG4P01861 327 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 VDAC1P21796 283 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 ZNF134P52741 427 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 CT45A1Q5HYN5 189 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 RAB12Q6IQ22 244 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 FAM53AQ6NSI3 398 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-219ENST00000440240 GLIPR1L1Q6UWM5 242 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 LCNL1Q6ZST4 164 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 GAPTQ8N292 157 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 JAGN1Q8N5M9 183 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 FAM71E2Q8N5Q1 922 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 ZNF439Q8NDP4 499 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 OR4K15Q8NH41 348 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 CT45A3Q8NHU0 189 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 TFAP2CQ92754 450 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 MUL1Q969V5 352 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 CLEC2DQ9UHP7 191 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 PEX16Q9Y5Y5 336 aa16.27■□□□□ 0.2
CPNE1-219ENST00000440240 TRAV8-7A0A075B6U6 113 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 FAM90A10PA6NDY2 464 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 FAM90A7PA6NKC0 464 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 FAM90A23PA8MXZ1 464 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 SLC31A2O15432 143 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 BAG2O95816 211 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 HBZP02008 142 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 GLAP06280 429 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 NHLRC4P0CG21 123 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-219ENST00000440240 OR5H8P0DN80 308 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 FSTP19883 344 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 F2RL1P55085 397 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 RPS11P62280 158 aaKnown RBP eCLIP16.26■□□□□ 0.19
CPNE1-219ENST00000440240 C9orf66Q5T8R8 295 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 PRR18Q8N4B5 295 aa16.26■□□□□ 0.19
CPNE1-219ENST00000440240 CHCHD6Q9BRQ6 235 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms