RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 SDCBPO00560 298 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ZNF780AO75290 641 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 GTF2F2P13984 249 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CD1BP29016 333 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MYCNOSP40205 109 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ADARB1P78563 741 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 YIF1BQ5BJH7 314 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CT45A1Q5HYN5 189 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 OR51D1Q8NGF3 324 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CT45A3Q8NHU0 189 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MRPS24Q96EL2 167 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ZNF580Q9UK33 172 aa11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 EXOSC1Q9Y3B2 195 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-203ENST00000437813 IGHV3-43A0A0B4J1X8 118 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 AP4M1O00189 453 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CSTBP04080 98 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 IGHV3-43DP0DP04 118 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 VAX1Q5SQQ9 334 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MOB3BQ86TA1 216 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ZNF695Q8IW36 515 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CDH26Q8IXH8 852 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ZFP41Q8N8Y5 198 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 OR2T10Q8NGZ9 312 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MYOZ3Q8TDC0 251 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 FBLIM1Q8WUP2 373 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CCDC107Q8WV48 283 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 GGHQ92820 318 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 OR14A2Q96R54 314 aa11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MBNL3Q9NUK0 354 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-203ENST00000437813 IRGMA1A4Y4 181 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 FAM90A7PA6NKC0 464 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 FAM90A23PA8MXZ1 464 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 AIPO00170 330 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 RPLP1P05386 114 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 RCC1P18754 421 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ATAD3CQ5T2N8 411 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 STEAP3Q658P3 488 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MUL1Q969V5 352 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 TMEM80Q96HE8 168 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 Q96M66 194 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 DERL3Q96Q80 235 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 S1PR3Q99500 378 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 HSPB9Q9BQS6 159 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 GPR61Q9BZJ8 451 aa11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MRPS28Q9Y2Q9 187 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MOSP00540 346 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 IGHG4P01861 327 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 HBZP02008 142 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CD1AP06126 327 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CDX1P47902 265 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 F2RL1P55085 397 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 GP2P55259 537 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ST3GAL4Q11206 333 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 FOXE3Q13461 319 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 GPR176Q14439 515 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 C6orf141Q5SZD1 244 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 RAB12Q6IQ22 244 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 GLIPR1L1Q6UWM5 242 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 LCNL1Q6ZST4 164 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 OR8H1Q8NGG4 311 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 OR1L1Q8NH94 360 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 DUX3Q96PT4 197 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 DCLRE1BQ9H816 532 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 SPACA1Q9HBV2 294 aa11.28□□□□□ -0.6
TNFRSF1A-203ENST00000437813 CCL24O00175 119 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 LANCL1O43813 399 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 CA11O75493 328 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 IGF1P05019 195 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 GLAP06280 429 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 GNAO1P09471 354 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 MYL12AP19105 171 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 PSMB8P28062 276 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 SLC35B1P78383 322 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 FHL3Q13643 280 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 KIAA0141Q14154 515 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 KIR2DS1Q14954 304 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 TTC23Q5W5X9 447 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 C5orf24Q7Z6I8 188 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 PACRGLQ8N7B6 248 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 OR4K15Q8NH41 348 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 FKBP14Q9NWM8 211 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 CNOT2Q9NZN8 540 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 PSORS1C1Q9UIG5 152 aa11.27□□□□□ -0.61
TNFRSF1A-203ENST00000437813 A0A1W2PPK0 400 aa11.26□□□□□ -0.61
TNFRSF1A-203ENST00000437813 NCBP2LA6PVI3 153 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms