RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 PQLC1Q8N2U9 271 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 OR52L2PQ8NGH6 319 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 HARBI1Q96MB7 349 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 SPACA5Q96QH8 159 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 C7orf50Q9BRJ6 194 aaKnown RBP3.76□□□□□ -1.81
UBE4A-202ENST00000431736 OR51I2Q9H344 312 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 ZNF256Q9Y2P7 627 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-202ENST00000431736 A0A1W2PPK0 400 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 OR5H14A6NHG9 310 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 NBR2O15453 112 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 ERP29P30040 261 aaKnown RBP3.76□□□□□ -1.81
UBE4A-202ENST00000431736 KLF17Q5JT82 389 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-202ENST00000431736 SYT6Q5T7P8 510 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-202ENST00000431736 METAP1DQ6UB28 335 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-202ENST00000431736 PLET1Q6UQ28 207 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 HEPN1Q6WQI6 88 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 SLC35G3Q8N808 338 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 DCUN1D4Q92564 292 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 RAB3CQ96E17 227 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 NIPSNAP1Q9BPW8 284 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 SPATA25Q9BR10 227 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 ISYNA1Q9NPH2 558 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 RBFOX1Q9NWB1 397 aaKnown RBP3.76□□□□□ -1.81
UBE4A-202ENST00000431736 JPT1Q9UK76 154 aa3.76□□□□□ -1.81
UBE4A-202ENST00000431736 RPS10-NUDT3A0A1W2PQS6 291 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 A0A1W2PS18 150 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 GABARAPH6UMI1 98 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 PDCD6O75340 191 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 GABARAPO95166 117 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 MGMTP16455 207 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 HCCSP53701 268 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 NUTF2P61970 127 aaKnown RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 MAB21L1Q13394 359 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 HLA-DRB5Q30154 266 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FAM122BQ7Z309 247 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 POFUT1Q9H488 388 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 HMG20AQ9NP66 347 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 CACFD1Q9UGQ2 172 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FOXJ3Q9UPW0 622 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 TLN2Q9Y4G6 2542 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 OR4C46A6NHA9 309 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 J3QR06 171 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 M0R129 80 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 PRKYO43930 277 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 IGLL1P15814 213 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 C4BPBP20851 252 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 CDK10Q15131 360 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 TRIM16LQ309B1 348 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 ELP2Q6IA86 826 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 LPCAT3Q6P1A2 487 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 SSX6Q7RTT6 188 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 NAA40Q86UY6 237 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 PACRGLQ8N7B6 248 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 SUMF2Q8NBJ7 301 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 C12orf4Q9NQ89 552 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 MCUBQ9NWR8 336 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 MRPL22Q9NWU5 206 aaKnown RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 DCAF16Q9NXF7 216 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FKBP11Q9NYL4 201 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 NPIPB11E5RHQ5 1161 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 PTBP3O95758 552 aaKnown RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 IFNA17P01571 189 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 EGR1P18146 543 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 CEACAM6P40199 344 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 HOXA1P49639 335 aaPredicted RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FXYD3Q14802 87 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 Q6ZR03 302 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 MMD2Q8IY49 270 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 LRRC75AQ8NAA5 344 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 PXT1Q8NFP0 134 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 OR52M1Q8NGK5 317 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 OR5H2Q8NGV7 314 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 OR4S2Q8NH73 311 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 CNIH3Q8TBE1 160 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FN1P02751 2386 aaKnown RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 A0A1W2PPE3 182 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 NUPL2O15504 423 aaKnown RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 ANXA3P12429 323 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 ACTBP60709 375 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 SPANXN2Q5MJ10 180 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 ZNF660Q6AZW8 331 aaPredicted RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 STPG3Q8N7X2 389 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 CD300LFQ8TDQ1 290 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 PHYHIPQ92561 330 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FCGR1BQ92637 280 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 SIRPDQ9H106 197 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 C16orf95Q9H693 158 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 TAF9BQ9HBM6 251 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 POLR3KQ9Y2Y1 108 aaPredicted RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 PRUNE2Q8WUY3 3088 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 A0A087WXM4 84 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 TEX13DA0A0J9YY54 714 aaPredicted RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 ZNF503-AS2A6NEH8 195 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FXYD4P59646 89 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 RPL23AP62750 156 aaKnown RBP3.75□□□□□ -1.81
UBE4A-202ENST00000431736 FOXE3Q13461 319 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 CATSPERDQ86XM0 798 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 THNSL2Q86YJ6 484 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 CROCCP3Q8IVE0 287 aa3.75□□□□□ -1.81
UBE4A-202ENST00000431736 ARPC1AQ92747 370 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms