RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 SAR1AQ9NR31 198 aa6.42□□□□□ -1.38
NIF3L1-206ENST00000416651 GID8Q9NWU2 228 aa6.42□□□□□ -1.38
NIF3L1-206ENST00000416651 NDE1Q9NXR1 346 aa6.42□□□□□ -1.38
NIF3L1-206ENST00000416651 GLS2Q9UI32 602 aa6.42□□□□□ -1.38
NIF3L1-206ENST00000416651 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
NIF3L1-206ENST00000416651 FOXA2Q9Y261 457 aaPredicted RBP6.42□□□□□ -1.38
NIF3L1-206ENST00000416651 NUBP2Q9Y5Y2 271 aa6.42□□□□□ -1.38
NIF3L1-206ENST00000416651 CCDC182A6NF36 153 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 LOC110117498-PIK3R3F6TDL0 507 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 MITFO75030 526 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 IFNGP01579 166 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 CSN2P05814 226 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 ATF4P18848 351 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 ALDH3A2P51648 485 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 FUT6P51993 359 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 ACTBP60709 375 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 ZNF45Q02386 682 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 PDZK1IP1Q13113 114 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 DEFB135Q30KP9 77 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 SPIN3Q5JUX0 258 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 SAMD4BQ5PRF9 694 aaKnown RBP6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 LCN12Q6JVE5 192 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 CD300LDQ6UXZ3 194 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 BCDIN3DQ7Z5W3 292 aaKnown RBP6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 Q8N402 240 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 OR51T1Q8NGJ9 327 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 ADAT3Q96EY9 351 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 KCTD14Q9BQ13 255 aaPredicted RBP6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 FBXL15Q9H469 300 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 SLC25A19Q9HC21 320 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 CNOT2Q9NZN8 540 aaKnown RBP6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 IKZF2Q9UKS7 526 aa6.41□□□□□ -1.38
NIF3L1-206ENST00000416651 FUOMA2VDF0 154 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 BBIP1A8MTZ0 92 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 C15orf65H3BRN8 121 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 DEGS1O15121 323 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 RPP14O95059 124 aaKnown RBP6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CTRB1P17538 263 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CCL1P22362 96 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 IFNGR2P38484 337 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 RIDAP52758 137 aaKnown RBP6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CX3CL1P78423 397 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 ROM1Q03395 351 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 LSAMPQ13449 338 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 GUCA2BQ16661 112 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 C5orf64Q2M2E5 130 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CT45A1Q5HYN5 189 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 BCL2L15Q5TBC7 163 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CTRB2Q6GPI1 263 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 LIN54Q6MZP7 749 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CGB2Q6NT52 195 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 WDR93Q6P2C0 686 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 SSX6Q7RTT6 188 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 ZNF679Q8IYX0 411 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 LINC00311Q8N616 119 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 ZNF439Q8NDP4 499 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 LFNGQ8NES3 379 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 OR10V1Q8NGI7 309 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 OR10AC1Q8NH08 325 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CT45A3Q8NHU0 189 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CCDC107Q8WV48 283 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 PYURFQ96I23 114 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 LRGUKQ96M69 825 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 RDH12Q96NR8 316 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 NR1H4Q96RI1 486 aaPredicted RBP6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 CLCC1Q96S66 551 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 FBXL17Q9UF56 701 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 MRM2Q9UI43 246 aaKnown RBP6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 X6R8D5 127 aa6.4□□□□□ -1.38
NIF3L1-206ENST00000416651 H0YJX3 145 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 TNFRSF11BO00300 401 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 KDM4BO94953 1096 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 TRGV3P03979 118 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 C21orf33P30042 268 aaPredicted RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 CRIP2P52943 208 aaPredicted RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 MTCP1P56278 107 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 SMIM11AP58511 58 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 RPS7P62081 194 aaKnown RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 RPL11P62913 178 aaKnown RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 APOFQ13790 326 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 PAN3Q58A45 887 aaKnown RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 TMEM236Q5W0B7 351 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 RPL13AP3Q6NVV1 102 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 UNQ5815/PRO19632Q6UWF5 114 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 Q8IYB0 196 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 Q8N1X5 172 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 TCEANCQ8N8B7 351 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 OR5T1Q8NG75 326 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 OR8H1Q8NGG4 311 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 RP9Q8TA86 221 aaKnown RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 ABHD5Q8WTS1 349 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 STON2Q8WXE9 905 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 GGTLC1Q9BX51 225 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 MRPL20Q9BYC9 149 aaKnown RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 MROQ9BYG7 248 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 CHST5Q9GZS9 411 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 CCDC134Q9H6E4 229 aa6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 RANGRFQ9HD47 186 aaPredicted RBP6.39□□□□□ -1.39
NIF3L1-206ENST00000416651 BAIAP2Q9UQB8 552 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms