RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 OR10K1Q8NGX5 313 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 CCDC107Q8WV48 283 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 TMED9Q9BVK6 235 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 ELOVL1Q9BW60 279 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 TNCP24821 2201 aa12.8□□□□□ -0.36
CHMP3-203ENST00000409225 A0A1W2PN81 502 aa12.79□□□□□ -0.36
CHMP3-203ENST00000409225 HLA-DRB1P01911 266 aa12.79□□□□□ -0.36
CHMP3-203ENST00000409225 CHRNA7P36544 502 aa12.79□□□□□ -0.36
CHMP3-203ENST00000409225 VHLP40337 213 aa12.79□□□□□ -0.36
CHMP3-203ENST00000409225 LSAMPQ13449 338 aa12.79□□□□□ -0.36
CHMP3-203ENST00000409225 FAHD1Q6P587 224 aa12.79□□□□□ -0.36
CHMP3-203ENST00000409225 RITA1Q96K30 269 aa12.79□□□□□ -0.36
CHMP3-203ENST00000409225 TMEM30CPA0ZSE6 113 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 ZAR1LA6NP61 321 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 C12orf77C9JDV5 145 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 SLC25A17O43808 307 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 SOX15O60248 233 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 HSPB1P04792 205 aaKnown RBP12.78□□□□□ -0.36
CHMP3-203ENST00000409225 ACTBP60709 375 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 HSP90B2PQ58FF3 399 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 OR10V1Q8NGI7 309 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
CHMP3-203ENST00000409225 ZNF251Q9BRH9 671 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 ANKRD60Q9BZ19 345 aa12.78□□□□□ -0.36
CHMP3-203ENST00000409225 SULT1B1O43704 296 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 HTR1AP08908 422 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 ZNF134P52741 427 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 ZNF137PP52743 207 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 RSU1Q15404 277 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 CT45A1Q5HYN5 189 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 ZNF439Q8NDP4 499 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 PXT1Q8NFP0 134 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 CT45A3Q8NHU0 189 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 TNFAIP8L1Q8WVP5 186 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 LINC00476Q8WZB0 136 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 FAM192AQ9GZU8 254 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 GNG12Q9UBI6 72 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 FOXA2Q9Y261 457 aaPredicted RBP12.77□□□□□ -0.37
CHMP3-203ENST00000409225 FBXO7Q9Y3I1 522 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 A3GALT2U3KPV4 340 aa12.77□□□□□ -0.37
CHMP3-203ENST00000409225 AQP12BA6NM10 295 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 NBR2O15453 112 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 ORC5O43913 435 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 FKBP6O75344 327 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 DCTN3O75935 186 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 HTR3BO95264 441 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 NDPQ00604 133 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 C5orf64Q2M2E5 130 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 Q3ZCU0 254 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 C19orf54Q5BKX5 351 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 LIN54Q6MZP7 749 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 SATL1Q86VE3 508 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 AQP12AQ8IXF9 295 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 GPER1Q99527 375 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 ZNF446Q9NWS9 450 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 ERGIC3Q9Y282 383 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
CHMP3-203ENST00000409225 GABRPO00591 440 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 LANCL1O43813 399 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 OR7C1O76099 320 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-203ENST00000409225 LY6G6CO95867 125 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 CSTBP04080 98 aaKnown RBP12.75□□□□□ -0.37
CHMP3-203ENST00000409225 LRRC36Q1X8D7 754 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 FDX2Q6P4F2 183 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 OR5D14Q8NGL3 314 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 DDB2Q92466 427 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 NRBF2Q96F24 287 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 MS4A10Q96PG2 267 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 CST11Q9H112 138 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 HIPK2Q9H2X6 1198 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 ST3GAL6Q9Y274 331 aa12.75□□□□□ -0.37
CHMP3-203ENST00000409225 OR4C45A6NMZ5 311 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 AIPO00170 330 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 HOXB6P17509 224 aaKnown RBP12.74□□□□□ -0.37
CHMP3-203ENST00000409225 CCR9P51686 369 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 GTSCR1Q86UQ5 136 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 SPATA24Q86W54 205 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 SERPINA12Q8IW75 414 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 PRR18Q8N4B5 295 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 ABHD5Q8WTS1 349 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 NSL1Q96IY1 281 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 MRPL20Q9BYC9 149 aaKnown RBP12.74□□□□□ -0.37
CHMP3-203ENST00000409225 DNAH10Q8IVF4 4471 aa12.74□□□□□ -0.37
CHMP3-203ENST00000409225 KMT2AQ03164 3969 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 H0Y980 276 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 SPINT2O43291 252 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 TPPP2P59282 170 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 RAB40BQ12829 278 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 ATAD3CQ5T2N8 411 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 KCTD20Q7Z5Y7 419 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 CPNE2Q96FN4 548 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-203ENST00000409225 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 CEPT1Q9Y6K0 416 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 HECTD4Q9Y4D8 3996 aa12.73□□□□□ -0.37
CHMP3-203ENST00000409225 RYR1P21817 5038 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 DAPL1A0PJW8 107 aa12.72□□□□□ -0.37
CHMP3-203ENST00000409225 J3QLW9 94 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms