RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 OBP2AQ9NY56 170 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 NAT8Q9UHE5 227 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 PTPRQQ9UMZ3 2332 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 CA1P00915 261 aaPredicted RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 SRP19P09132 144 aaKnown RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 CDKN1AP38936 164 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 TRIP6Q15654 476 aaKnown RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 DEFB110Q30KQ9 67 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 TMEM52BQ4KMG9 183 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 HLA-DQA1Q5Y7H0 255 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 OR4C11Q6IEV9 310 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 MED25Q71SY5 747 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 LYZL2Q7Z4W2 148 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 TMEM144Q7Z5S9 345 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 CDC20BQ86Y33 519 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 SLAMF6Q96DU3 332 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 GNRHR2Q96P88 292 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 RBKSQ9H477 322 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 C6orf106Q9H6K1 298 aaPredicted RBP7.37□□□□□ -1.23
NDE1-202ENST00000396355 PELI2Q9HAT8 420 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 CYTL1Q9NRR1 136 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 KIAA1456Q9P272 454 aa7.37□□□□□ -1.23
NDE1-202ENST00000396355 A0A1W2PN81 502 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 LRRC3CA6NJW4 275 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 CORTO00230 105 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 SIRPB1O00241 398 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 RBFOX2O43251 390 aaKnown RBP eCLIP7.36□□□□□ -1.232e-8■■■■■ 29.6
NDE1-202ENST00000396355 LDB3O75112 727 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 ZNF43P17038 809 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 BCL6P41182 706 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 SLC6A8P48029 635 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 TMEM176BQ3YBM2 270 aaPredicted RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 OR2C3Q8N628 320 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 ADAT3Q96EY9 351 aaPredicted RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 SPIN2AQ99865 258 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 SPIN2BQ9BPZ2 258 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 GEMIN7Q9H840 131 aaKnown RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 PLSCR2Q9NRY7 297 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 SPTBN1Q01082 2364 aaKnown RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 TRAV30A0A087WSZ9 112 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 A0A1W2PR48 441 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 GYPAP02724 150 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 THY1P04216 161 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 LHX2P50458 406 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 DYNLT3P51808 116 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 CST6Q15828 149 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 SYS1Q8N2H4 156 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 FAM174AQ8TBP5 190 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 DUSP15Q9H1R2 295 aaPredicted RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 SLC45A2Q9UMX9 530 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 MRPS28Q9Y2Q9 187 aaKnown RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 TBL2Q9Y4P3 447 aaKnown RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 HSPB6O14558 160 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 NPIPB7O75200 414 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 HRASP01112 189 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 PEBP1P30086 187 aaKnown RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 P2RY1P47900 373 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 MLC1Q15049 377 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 TMEM196Q5HYL7 178 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 ZNF776Q68DI1 518 aaPredicted RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 CD300LDQ6UXZ3 194 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 ADAMTSL4Q6UY14 1074 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 AQP10Q96PS8 301 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 OR4C12Q96R67 309 aa7.36□□□□□ -1.23
NDE1-202ENST00000396355 ZNF331Q9NQX6 463 aaPredicted RBP7.36□□□□□ -1.23
NDE1-202ENST00000396355 A0A087WUJ7 227 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 A0A1B0GWA3 101 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 G3V3Y1 287 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 K7ESF4 209 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 B3GALT2O43825 422 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 CTSVO60911 334 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PMELP40967 661 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 CAMPP49913 170 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 HERV-K104P63124 156 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PAFAH1B2P68402 229 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PAX2Q02962 417 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 SLC25A26Q70HW3 274 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 ZNF764Q96H86 408 aaPredicted RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 ATP6V0BQ99437 205 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 RSG1Q9BU20 258 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 STARD5Q9NSY2 213 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 KCNIP1Q9NZI2 227 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 ST6GALNAC2Q9UJ37 374 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 MYO7BQ6PIF6 2116 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 CLEC18AA5D8T8 446 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 ZNF217O75362 1048 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 PVRP15151 417 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 EXOSC7Q15024 291 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 KCNMB1Q16558 191 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 BRICD5Q6PL45 260 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 SSX8Q7RTT4 187 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 CLEC18CQ8NCF0 446 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 OR51H1Q8NH63 302 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 EMG1Q92979 244 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 ANGPTL4Q9BY76 406 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 WDR61Q9GZS3 305 aaKnown RBP7.35□□□□□ -1.23
NDE1-202ENST00000396355 WDR54Q9H977 334 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 HRASLS2Q9NWW9 162 aa7.35□□□□□ -1.23
NDE1-202ENST00000396355 VDAC3Q9Y277 283 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1221.6 ms