RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DACT3Q96B18 629 aaPredicted RBP16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 OR8B2Q96RD0 313 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 OR1A1Q9P1Q5 309 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 ALG5Q9Y673 324 aa16.92■□□□□ 0.3
VCPKMT-202ENST00000395860 hADV38S2A0JD32 116 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 FAM172BPA6NC97 362 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 NPIPB11E5RHQ5 1161 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 C15orf65H3BRN8 121 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 PPYP01298 95 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 MECP2P51608 486 aaKnown RBP16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 RPL31P62899 125 aaKnown RBP16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 BAMBIQ13145 260 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 SURF2Q15527 256 aaPredicted RBP16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 TOMM40LQ969M1 308 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 MARVELD3Q96A59 401 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 MOB3AQ96BX8 217 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 NEIL1Q96FI4 390 aaPredicted RBP16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 FXYD6Q9H0Q3 95 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 ZNF69Q9UC07 566 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 GPR132Q9UNW8 380 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 TENM4Q6N022 2769 aa16.91■□□□□ 0.3
VCPKMT-202ENST00000395860 PRAF2O60831 178 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 ZBTB25P24278 435 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 PDLIM4P50479 330 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 BCAP31P51572 246 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 ATP5J2P56134 94 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 MEF2CQ06413 473 aaPredicted RBP16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 H1FOOQ8IZA3 346 aaPredicted RBP16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 CADM3Q8N126 398 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 RFESDQ8TAC1 157 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 NARFLQ9H6Q4 476 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 RAB9BQ9NP90 201 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 CALYQ9NYX4 217 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 DOCK11Q5JSL3 2073 aa16.9■□□□□ 0.3
VCPKMT-202ENST00000395860 ZNF728P0DKX0 622 aa16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 TCF23Q7RTU1 214 aa16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 CORO2AQ92828 525 aa16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 NINJ1Q92982 152 aa16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 BARX1Q9HBU1 254 aaPredicted RBP16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 C19orf12Q9NSK7 152 aa16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 LPAR3Q9UBY5 353 aa16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 UBE2J1Q9Y385 318 aaPredicted RBP16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 LINC00312Q9Y6C7 94 aa16.89■□□□□ 0.3
VCPKMT-202ENST00000395860 ZNF729A6NN14 1252 aaPredicted RBP16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 TUSC2O75896 110 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 HEXAP06865 529 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 WNT2P09544 360 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 CEACAM6P40199 344 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 ZNF841Q6ZN19 808 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 OR52L2PQ8NGH6 319 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 ZFAND1Q8TCF1 268 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 C5orf66Q9H5L9 145 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 OR2S2Q9NQN1 319 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 RDH8Q9NYR8 311 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 C14orf166Q9Y224 244 aaKnown RBP16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 OR2W1Q9Y3N9 320 aa16.89■□□□□ 0.29
VCPKMT-202ENST00000395860 A0A0A6YYJ9 748 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 CGB3P0DN86 165 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 CGB7P0DN87 165 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 VSIG10L2P0DP72 767 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 CBX3Q13185 183 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 LTC4SQ16873 150 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 C17orf58Q2M2W7 97 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 GLDNQ6ZMI3 551 aaPredicted RBP16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 FAM185AQ8N0U4 392 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 ALX4Q9H161 411 aaPredicted RBP16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 PATZ1Q9HBE1 687 aaKnown RBP16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 GPN1Q9HCN4 374 aaPredicted RBP16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 CLN8Q9UBY8 286 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 YLPM1P49750 1951 aaKnown RBP16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 DOPEY2Q9Y3R5 2298 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 AKAP6Q13023 2319 aa16.88■□□□□ 0.29
VCPKMT-202ENST00000395860 KBTBD11-OT1A0A1B0GTJ5 212 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 C7orf66A4D0T2 115 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 GPR37O15354 613 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 IL5P05113 134 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 PI3P19957 117 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 UCP3P55916 312 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 HTD2P86397 168 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 C4orf46Q504U0 113 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 METTL11BQ5VVY1 283 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 ADAD2Q8NCV1 583 aaKnown RBP16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 CAPSLQ8WWF8 208 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 PERPQ96FX8 193 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 SEC22CQ9BRL7 303 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 TAS2R3Q9NYW6 316 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 IGHV3-43A0A0B4J1X8 118 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 IGHV3-43DP0DP04 118 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 AKR1C4P17516 323 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 TAS2R31P59538 309 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 ZNF273Q14593 569 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 TMEM200BQ69YZ2 307 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 SLC25A42Q86VD7 318 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 SLC38A6Q8IZM9 456 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 SECTM1Q8WVN6 248 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 RTBDNQ9BSG5 229 aaPredicted RBP16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 BPESC1Q9GZL8 116 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 GAL3ST2Q9H3Q3 398 aa16.87■□□□□ 0.29
VCPKMT-202ENST00000395860 TRBV23-1A0A0A0MS06 115 aa16.86■□□□□ 0.29
VCPKMT-202ENST00000395860 F2RL2O00254 374 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms