RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 IMMP1LQ96LU5 166 aa7.91□□□□□ -1.14
LIMCH1-202ENST00000381753 BCL7BQ9BQE9 202 aa7.91□□□□□ -1.14
LIMCH1-202ENST00000381753 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
LIMCH1-202ENST00000381753 ZP1P60852 638 aa7.91□□□□□ -1.14
LIMCH1-202ENST00000381753 FAM27BQ5VT28 67 aa7.91□□□□□ -1.14
LIMCH1-202ENST00000381753 OR2G2Q8NGZ5 317 aa7.91□□□□□ -1.14
LIMCH1-202ENST00000381753 AHCTF1Q8WYP5 2266 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 JTBO76095 146 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 PRSS23O95084 383 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 PLA2G2AP14555 144 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 CRYGSP22914 178 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 MST1P26927 711 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 SLC25A1P53007 311 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 TCTE3Q8IZS6 198 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 SORT1Q99523 831 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 OR51J1Q9H342 316 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 ZNF385DQ9H6B1 395 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 MRPL22Q9NWU5 206 aaKnown RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 LSM2Q9Y333 95 aaKnown RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 NGFRP08138 427 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 ACSM4P0C7M7 580 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 RPL7P18124 248 aaKnown RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 CD200P41217 278 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 OR2B8PP59922 312 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 Q1RN00 199 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 ZNF362Q5T0B9 420 aaPredicted RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 FAM122CQ6P4D5 195 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 CDCA4Q9BXL8 241 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 ACTR3CQ9C0K3 210 aaPredicted RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 A0A1B0GUS0 222 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 J3QLI3 93 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 FADS1O60427 444 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 PIGPP57054 158 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 RBMS2Q15434 407 aaKnown RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 LINC00596Q86U02 117 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 LRRTM1Q86UE6 522 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 BVESQ8NE79 360 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 ZNF436Q9C0F3 470 aaPredicted RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 SAV1Q9H4B6 383 aaPredicted RBP7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 CALYQ9NYX4 217 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 SEMA5BQ9P283 1151 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 FAM186AA6NE01 2351 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 MUC6Q6W4X9 2439 aa7.9□□□□□ -1.14
LIMCH1-202ENST00000381753 TRAV39A0A0B4J263 110 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 SNAPINO95295 136 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 HCP5Q6MZN7 132 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 ETV3LQ6ZN32 361 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 SIGLECL1Q8N7X8 197 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 SYT11Q9BT88 431 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 CHRNA10Q9GZZ6 450 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 CREBBPQ92793 2442 aa7.9□□□□□ -1.15
LIMCH1-202ENST00000381753 ZNF729A6NN14 1252 aaPredicted RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 CTSBP07858 339 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 NAT1P18440 290 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 DEGS2Q6QHC5 323 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 OR52I1Q8NGK6 324 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 ADIPOR1Q96A54 375 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 OR51B2Q9Y5P1 312 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 RPL35P42766 123 aaKnown RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 FOXF2Q12947 444 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 C14orf79Q96F83 325 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 MRPL37Q9BZE1 423 aaKnown RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 IGHV3-35A0A0C4DH35 117 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 NPIPB6E9PJ23 425 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 TCAPO15273 167 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 IGHV3-23P01764 117 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 CD1BP29016 333 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 CEBPDP49716 269 aaPredicted RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 P2RX3P56373 397 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 VMO1Q7Z5L0 202 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 RBPMSQ93062 196 aaKnown RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 UQCC2Q9BRT2 126 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 CD300AQ9UGN4 299 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 TMEM235A6NFC5 223 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 CLEC2LP0C7M8 214 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 PSMB1P20618 241 aaKnown RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 NUDCD2Q8WVJ2 157 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 TDRD15B5MCY1 1934 aaKnown RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 TBX19O60806 448 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 PITX3O75364 302 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 NQO2P16083 231 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 COX5AP20674 150 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 DGAT2L6Q6ZPD8 337 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 RFPL4BQ6ZWI9 263 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 OVCH2Q7RTZ1 564 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 LURAP1Q96LR2 239 aa7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 CHCHD2Q9Y6H1 151 aaPredicted RBP7.89□□□□□ -1.15
LIMCH1-202ENST00000381753 TRDCB7Z8K6 153 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 KLK8O60259 260 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 MOSP00540 346 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 HMGN3Q15651 99 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 CEACAM21Q3KPI0 293 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 OR9G4Q8NGQ1 327 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 PRORYQ9H606 182 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 KLK5Q9Y337 293 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 CDRT15L2A8MXV6 281 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 CA11O75493 328 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 PTTG1O95997 202 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 LHBP01229 141 aa7.88□□□□□ -1.15
LIMCH1-202ENST00000381753 RAB5CP51148 216 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms