RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 INSM1Q01101 510 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 IZUMO4Q1ZYL8 232 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 MS4A18Q3C1V0 323 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 CDX4O14627 284 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 HEPN1Q6WQI6 88 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 BCORQ6W2J9 1755 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 IGHV5-51A0A0C4DH38 117 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 COLCA2A8K830 154 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 M0QZ24 198 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF645Q8N7E2 425 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 DPF1Q92782 380 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 IL18BPO95998 194 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 FADS6Q8N9I5 356 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 OR2J1Q9GZK6 312 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 TUSC2O75896 110 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF611Q8N823 705 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 GNRHR2Q96P88 292 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF16P17020 682 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 FNDC7Q5VTL7 733 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 RBP4P02753 201 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 EWSR1Q01844 656 aaKnown RBP eCLIP4.28□□□□□ -1.72
PCDH9-201ENST00000377861 RPEL1Q2QD12 228 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 CBLN2Q8IUK8 224 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 TCL1AP56279 114 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 LDLRAD3Q86YD5 345 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 OR11H4Q8NGC9 324 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 UBE2G1P62253 170 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 NAPSAO96009 420 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF250P15622 560 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 FXYD4P59646 89 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 PPP1R3CQ9UQK1 317 aa4.28□□□□□ -1.72
PCDH9-201ENST00000377861 PSG9Q00887 426 aa4.28□□□□□ -1.73
PCDH9-201ENST00000377861 MACROD1Q9BQ69 325 aa4.28□□□□□ -1.73
PCDH9-201ENST00000377861 G6PC2Q9NQR9 355 aa4.28□□□□□ -1.73
PCDH9-201ENST00000377861 A0A0U1RQK1 487 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF320A2RRD8 509 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TMEM187Q14656 261 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 OR4D11Q8NGI4 311 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 CLDN2P57739 230 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 BCDIN3DQ7Z5W3 292 aaKnown RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TNFRSF19Q9NS68 423 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 HCFC1R1Q9NWW0 138 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 YPEL1O60688 119 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 LILRA3Q8N6C8 439 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 YPEL2Q96QA6 119 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TRAV8-7A0A075B6U6 113 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 LOC105371267A0A1B0GV96 52 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 ACRP10323 421 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 A0A1W2PS18 150 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 RNFT1Q5M7Z0 435 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 CACNG4Q9UBN1 327 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 RGPD8O14715 1765 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 SCN7AQ01118 1682 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 AKR1C1Q04828 323 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 C2orf68Q2NKX9 166 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 OR5P3Q8WZ94 311 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 SLC25A2Q9BXI2 301 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 PARM1Q6UWI2 310 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 Q8N9G6 341 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 LYPD3O95274 346 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 RPL8P62917 257 aaKnown RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 PRAMEF5Q5TYX0 476 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 PRAMEF6Q5VXH4 476 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 STUMQ69YW2 141 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 SHISA6Q6ZSJ9 500 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 RTBDNQ9BSG5 229 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TMPRSS2O15393 492 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 HABP2Q14520 560 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TCF23Q7RTU1 214 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 RHOVQ96L33 236 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 GCM1Q9NP62 436 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 NGFP01138 241 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 FOXF1Q12946 379 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 SPATA31B1PQ5VZV4 182 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 RASL10BQ96S79 203 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 MRPL27Q9P0M9 148 aaKnown RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 VEGFBP49765 207 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 Q6ZT83 130 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 Q8WTZ3 238 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 DEFA4P12838 97 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 FLYWCH2Q96CP2 140 aaKnown RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 S1PR2O95136 353 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 NUDT3O95989 172 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 ERV3-1Q14264 604 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 C2orf88Q9BSF0 95 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 NAGKQ9UJ70 344 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 KLF3P57682 345 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 NEUROG1Q92886 237 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 ZNF705BP0CI00 300 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 CCNOP22674 350 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 NANOS3P60323 173 aaKnown RBP4.27□□□□□ -1.73
PCDH9-201ENST00000377861 Q0VG73 95 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 UBALD1Q8TB05 177 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 NDUFB3O43676 98 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 LMO1P25800 156 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 TMEM144Q7Z5S9 345 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 OR2M3Q8NG83 312 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 C18orf12Q96KH6 178 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 DLL1O00548 723 aa4.27□□□□□ -1.73
PCDH9-201ENST00000377861 SLC7A10Q9NS82 523 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms