RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZBTB34Q8NCN2 500 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 FDCSPQ8NFU4 85 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 ADIPOR1Q96A54 375 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 HAX1O00165 279 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 TIAF1O95411 115 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
GPC6-201ENST00000377047 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
GPC6-201ENST00000377047 WISP3O95389 354 aaPredicted RBP11.83□□□□□ -0.52
GPC6-201ENST00000377047 SLC35B1P78383 322 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 PERPQ96FX8 193 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 A1L4Q6 167 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 HPXP02790 462 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 CAMPP49913 170 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 SLC25A42Q86VD7 318 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 MRPL24Q96A35 216 aaKnown RBP11.83□□□□□ -0.52
GPC6-201ENST00000377047 STARD4Q96DR4 205 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 NPAS1Q99742 590 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 NIT2Q9NQR4 276 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 MGST3O14880 152 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
GPC6-201ENST00000377047 KIR3DL2P43630 455 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 MRGPRGQ86SM5 289 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
GPC6-201ENST00000377047 BVESQ8NE79 360 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 NKX2-6A6NCS4 301 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 KIAA1324LA8MWY0 1029 aaPredicted RBP11.82□□□□□ -0.52
GPC6-201ENST00000377047 PRSS23O95084 383 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 TEX29Q8N6K0 151 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 EAF1Q96JC9 268 aaPredicted RBP11.82□□□□□ -0.52
GPC6-201ENST00000377047 SRXN1Q9BYN0 137 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 PCM1Q15154 2024 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 A0A0U1RQV5 110 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 PF4V1P10720 104 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 NPY1RP25929 384 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 RAG2P55895 527 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 C8orf82Q6P1X6 216 aaPredicted RBP11.82□□□□□ -0.52
GPC6-201ENST00000377047 C16orf82Q7Z2V1 217 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 SFXN3Q9BWM7 321 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 SPCS3P61009 180 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 ZNF552Q9H707 407 aaPredicted RBP11.82□□□□□ -0.52
GPC6-201ENST00000377047 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 TFPI2P48307 235 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 GUCA2BQ16661 112 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 TUSC1Q2TAM9 212 aa11.82□□□□□ -0.52
GPC6-201ENST00000377047 CEBPDP49716 269 aaPredicted RBP11.81□□□□□ -0.52
GPC6-201ENST00000377047 GZMMP51124 257 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 EFNB2P52799 333 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 CDK2AP1O14519 115 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 MGPP08493 103 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 LINC01560Q8TB33 94 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 TMEM37Q8WXS4 190 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 Q9N2K0 584 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 BRWD1Q9NSI6 2320 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 C4orf51C9J302 202 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 HBZP02008 142 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 RFLNBQ8N5W9 214 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 ST6GALNAC2Q9UJ37 374 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 AUP1Q9Y679 476 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 SMPD2O60906 423 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 UQCC3Q6UW78 93 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 OR2H2O95918 312 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 TMEM50BP56557 158 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 ZNF66Q6ZN08 573 aa11.81□□□□□ -0.52
GPC6-201ENST00000377047 FCN1O00602 326 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 NANOS3P60323 173 aaKnown RBP11.8□□□□□ -0.52
GPC6-201ENST00000377047 METTL1Q9UBP6 276 aaKnown RBP11.8□□□□□ -0.52
GPC6-201ENST00000377047 A0A1W2PNV4 684 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 SCO1O75880 301 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 FAM87AP0C7U9 286 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 HIST1H1EP10412 219 aaKnown RBP11.8□□□□□ -0.52
GPC6-201ENST00000377047 RPL13AP40429 203 aaKnown RBP11.8□□□□□ -0.52
GPC6-201ENST00000377047 WNT5AP41221 380 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 NHLH1Q02575 133 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 NHLH2Q02577 135 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 PRSS53Q2L4Q9 553 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 ZNF561Q8N587 486 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 SLC35B3Q9H1N7 401 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 MBPP02686 304 aaPredicted RBP11.8□□□□□ -0.52
GPC6-201ENST00000377047 OR5AL1P0C617 328 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 PDLIM4P50479 330 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 HIST1H3AP68431 136 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 SLC25A47Q6Q0C1 308 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 KNTC1P50748 2209 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 RBBP6Q7Z6E9 1792 aaKnown RBP11.8□□□□□ -0.52
GPC6-201ENST00000377047 CEACAM1P13688 526 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 LY6EQ16553 131 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 GCSAMQ8N6F7 178 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 OR8G5Q8NG78 346 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 ABHD14BQ96IU4 210 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 FGF12P61328 243 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 SEZ6L2Q6UXD5 910 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 PPP1R32Q7Z5V6 425 aa11.8□□□□□ -0.52
GPC6-201ENST00000377047 MARS2Q96GW9 593 aaKnown RBP11.8□□□□□ -0.52
GPC6-201ENST00000377047 FCGR3AP08637 254 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 ANKRD55Q3KP44 614 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 WASHC3Q9Y3C0 194 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms