RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 OR52M1Q8NGK5 317 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 LINC01560Q8TB33 94 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 TMEM222Q9H0R3 208 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 HRH4Q9H3N8 390 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 ELOVL5Q9NYP7 299 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 UBE2J1Q9Y385 318 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-202ENST00000374876 ATP23Q9Y6H3 246 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 ARID1AO14497 2285 aa13.16□□□□□ -0.3
CCDC40-202ENST00000374876 ABCD4O14678 606 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 HS3ST1O14792 307 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 ST8SIA3O43173 380 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 FBXO24O75426 580 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 ATG12O94817 140 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 MST1LQ2TV78 715 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 Q6ZT83 130 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 TBC1D26Q86UD7 250 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 TSNAXQ99598 290 aaKnown RBP13.15□□□□□ -0.3
CCDC40-202ENST00000374876 PKIBQ9C010 78 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 GPR31O00270 319 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 GPR137BO60478 399 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 GLAP06280 429 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 IGFBP2P18065 325 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 UBE2NP61088 152 aaKnown RBP13.15□□□□□ -0.3
CCDC40-202ENST00000374876 TGFBR3Q03167 851 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 PJVKQ0ZLH3 352 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 IL13RA2Q14627 380 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 HERPUD1Q15011 391 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 GPR157Q5UAW9 335 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 C22orf34Q6ZV56 151 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 LDLRAD3Q86YD5 345 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 GTF3AQ92664 365 aaKnown RBP13.15□□□□□ -0.3
CCDC40-202ENST00000374876 NKX6-2Q9C056 277 aaPredicted RBP13.15□□□□□ -0.3
CCDC40-202ENST00000374876 OR51I2Q9H344 312 aa13.15□□□□□ -0.3
CCDC40-202ENST00000374876 PKDREJQ9NTG1 2253 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 LYZL6O75951 148 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 IGHV1-2P23083 117 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 P2RY1P47900 373 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 KCNJ3P48549 501 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 SULT1A2P50226 295 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 RND3P61587 244 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 ZNF818PQ6ZRF7 136 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 DMRTC2Q8IXT2 367 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-202ENST00000374876 GAPTQ8N292 157 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 C17orf78Q8N4C9 275 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 UBAC2Q8NBM4 344 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 OR4A4PQ8NGN8 299 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 RDH5Q92781 318 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 ERGIC1Q969X5 290 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
CCDC40-202ENST00000374876 C16orf97H3BN30 126 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 J3QW42 95 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 CDS2O95674 445 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 LPAR6P43657 344 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 BLOC1S1P78537 153 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 SRSF3P84103 164 aaKnown RBP13.13□□□□□ -0.31
CCDC40-202ENST00000374876 GNMTQ14749 295 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 ZNF787Q6DD87 383 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 CLEC9AQ6UXN8 241 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 SVBPQ8N300 66 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 MRPL30Q8TCC3 161 aaKnown RBP13.13□□□□□ -0.31
CCDC40-202ENST00000374876 RTL8AQ9BWD3 113 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 BORCS7-ASMTA0A0B4J1R7 106 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 TRAV24A0A0B4J272 114 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 IGKV1D-13A0A0B4J2D9 117 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 IGKV1-6A0A0C4DH72 117 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 F8W036 122 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 J3QT63 122 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 HSD17B6O14756 317 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 RHBDL1O75783 438 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 TUSC2O75896 110 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 CELA3BP08861 270 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 IGKV1-13P0DP09 117 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 ZNF14P17017 642 aaPredicted RBP13.13□□□□□ -0.31
CCDC40-202ENST00000374876 CCKARP32238 428 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 OR4D5Q8NGN0 318 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 WFIKKN1Q96NZ8 548 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 RHOFQ9HBH0 211 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 CDH20Q9HBT6 801 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
CCDC40-202ENST00000374876 POMT1Q9Y6A1 747 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
CCDC40-202ENST00000374876 CRYBG3Q68DQ2 2970 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 A0A1W2PR80 420 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 DEGS1O15121 323 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 COX6B1P14854 86 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 ZNF44P15621 663 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 IDH3GP51553 393 aaPredicted RBP13.12□□□□□ -0.31
CCDC40-202ENST00000374876 PPP1CBP62140 327 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 SWI5Q1ZZU3 235 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 C20orf204Q6ZNR8 217 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 MYPOPQ86VE0 399 aaPredicted RBP13.12□□□□□ -0.31
CCDC40-202ENST00000374876 SPIN2AQ99865 258 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 SPIN2BQ9BPZ2 258 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 SPOCK3Q9BQ16 436 aa13.12□□□□□ -0.31
CCDC40-202ENST00000374876 TMEM231Q9H6L2 316 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms