RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MEOX1P50221 254 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 CA5BP1Q8WTZ4 195 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 ELOVL1Q9BW60 279 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 IL17BQ9UHF5 180 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 VPS13AQ96RL7 3174 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 DOCK9Q9BZ29 2069 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 IGSF23A1L1A6 192 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 COL19A1Q14993 1142 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 NSUN5P2Q63ZY6 315 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 SCGB1D4Q6XE38 83 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 GAPTQ8N292 157 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 SLC25A45Q8N413 288 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 OR10D3Q8NH80 312 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 VSTM2AQ8TAG5 236 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 PILRBQ9UKJ0 227 aa10.77□□□□□ -0.69
NPLOC4-202ENST00000374747 MEX3AA1L020 520 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 RIGQ13278 110 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 OR4D11Q8NGI4 311 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 OR4P4Q8NGL7 312 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 PTP4A1Q93096 173 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 VOPP1Q96AW1 172 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 HRKO00198 91 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 CD226Q15762 336 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 OR1B1Q8NGR6 318 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 GRAMD2BQ96HH9 432 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 PAM16Q9Y3D7 125 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 PAGE4O60829 102 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 SUCLG1P53597 346 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 HERVK_113P61574 105 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 ZNF343Q6P1L6 599 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 OVCH2Q7RTZ1 564 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 ATG4DQ86TL0 474 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 BPIFA4PQ86YQ2 179 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 OR1L1Q8NH94 360 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 ATG101Q9BSB4 218 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 FLRT3Q9NZU0 649 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 NAGKQ9UJ70 344 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 HSPB8Q9UJY1 196 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 A0A1W2PR77 199 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 SNURFLB1AK76 121 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 CORTO00230 105 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 MELTFP08582 738 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 LSM6P62312 80 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 TMEM91Q6ZNR0 172 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 GPX7Q96SL4 187 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 SMDT1Q9H4I9 107 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 CA10Q9NS85 328 aa10.76□□□□□ -0.69
NPLOC4-202ENST00000374747 TRGV8A0A0C4DH27 118 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 MS4A18H0YCH9 400 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 G6PCP35575 357 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 ISXQ2M1V0 245 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 MS4A18Q3C1V0 323 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 ADAD2Q8NCV1 583 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 UFC1Q9Y3C8 167 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 HAND1O96004 215 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 IFI6P09912 130 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 KHDC3LQ587J8 217 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 DOLPP1Q86YN1 238 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 ALX4Q9H161 411 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 CXXC4Q9H2H0 198 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 RTTNQ86VV8 2226 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 A0A1W2PR80 420 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 SMPD2O60906 423 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 IER3P46695 156 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 ZNF83P51522 516 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 MRPL30Q8TCC3 161 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 VN1R17PQ8TDU5 208 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 RGP1Q92546 391 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 CTXND1A0A1B0GTU2 59 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 K7ERU9 68 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 K7ESF4 209 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 ORM1P02763 201 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 FAM157CP0CG43 387 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 COL8A1P27658 744 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 NAAAQ02083 359 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 LYZL2Q7Z4W2 148 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 OR2M3Q8NG83 312 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 SAP25Q8TEE9 199 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 VWCEQ96DN2 955 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 AP5S1Q9NUS5 200 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 FZR1Q9UM11 496 aa10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 AMMECR1Q9Y4X0 333 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-202ENST00000374747 ARID1AO14497 2285 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 TRAV8-7A0A075B6U6 113 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 OOEPA6NGQ2 149 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 IGLV3-19P01714 112 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 HOXA6P31267 233 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 PRRX1P54821 245 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 FAM3BP58499 235 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 OR4A4PQ8NGN8 299 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 SMIM12Q96EX1 92 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 CLEC5AQ9NY25 188 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 RCC2Q9P258 522 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 PCDHGA9Q9Y5G4 932 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 THSD7BQ9C0I4 1608 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 NKX2-6A6NCS4 301 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 HELTA6NFD8 242 aa10.74□□□□□ -0.69
NPLOC4-202ENST00000374747 ISLRO14498 428 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms