RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OOEPA6NGQ2 149 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 FHITP49789 147 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 FHL5Q5TD97 284 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 OR2M3Q8NG83 312 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 LRRC3BQ96PB8 259 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
COL17A1-202ENST00000369733 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 FAM157CP0CG43 387 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 VWA1Q6PCB0 445 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 SPEM1Q8N4L4 309 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 TMEM38BQ9NVV0 291 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 P4HTMQ9NXG6 502 aa13.88□□□□□ -0.19
COL17A1-202ENST00000369733 HELTA6NFD8 242 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 CD99P14209 185 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 HLA-BQ31612 363 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 OR52M1Q8NGK5 317 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 OR2I1PQ8NGU4 316 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 OR4S2Q8NH73 311 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 TRGV5A0A0B4J1U4 118 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 NEURL1O76050 574 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 HFEQ30201 348 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 APOBEC4Q8WW27 367 aaKnown RBP13.87□□□□□ -0.19
COL17A1-202ENST00000369733 CLN8Q9UBY8 286 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 CXorf66Q5JRM2 361 aaPredicted RBP13.87□□□□□ -0.19
COL17A1-202ENST00000369733 SFTPA2Q8IWL1 248 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 IGKV1D-42A0A075B6H8 117 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 OR2J3O76001 311 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 APCSP02743 223 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 RBP4P02753 201 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 TRGC1P0CF51 173 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 EFNB1P98172 346 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 C9orf50Q5SZB4 431 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 G6PC2Q9NQR9 355 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 COL11A2P13942 1736 aaPredicted RBP13.87□□□□□ -0.19
COL17A1-202ENST00000369733 IGHV1OR15-9A0A0B4J2B8 117 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 NXPH1P58417 271 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 KCNK17Q96T54 332 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 HSPB9Q9BQS6 159 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 FAM206AQ9NX38 181 aa13.87□□□□□ -0.19
COL17A1-202ENST00000369733 HAND1O96004 215 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 CSN3P07498 182 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 MEF2BQ02080 365 aaPredicted RBP13.86□□□□□ -0.19
COL17A1-202ENST00000369733 TMEM97Q5BJF2 176 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 WDR25Q64LD2 544 aaPredicted RBP13.86□□□□□ -0.19
COL17A1-202ENST00000369733 FDX2Q6P4F2 183 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 OR2T6Q8NHC8 308 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 D2HGDHQ8N465 521 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 OR10AD1Q8NGE0 317 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 ZNF385AQ96PM9 386 aaKnown RBP13.86□□□□□ -0.19
COL17A1-202ENST00000369733 RNF2Q99496 336 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 DDA1Q9BW61 102 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 AAMDCQ9H7C9 122 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 MYOZ1Q9NP98 299 aaPredicted RBP13.86□□□□□ -0.19
COL17A1-202ENST00000369733 KIR2DL1P43626 348 aaPredicted RBP13.86□□□□□ -0.19
COL17A1-202ENST00000369733 GPR35Q9HC97 309 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 LRRC37AA6NMS7 1700 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 H0Y980 276 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 POU2F2P09086 479 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 TMEM204Q9BSN7 226 aa13.86□□□□□ -0.19
COL17A1-202ENST00000369733 TEX30Q5JUR7 227 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 SLC23A3Q6PIS1 610 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 REC114Q7Z4M0 266 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 LINC00596Q86U02 117 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 WFDC8Q8IUA0 241 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 NUDT16L1Q9BRJ7 211 aaKnown RBP13.85□□□□□ -0.19
COL17A1-202ENST00000369733 ZPBPQ9BS86 351 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 MAP1LC3CQ9BXW4 147 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 CXXC4Q9H2H0 198 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 TAF1LQ8IZX4 1826 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 CDIPTO14735 213 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 EIF4E3Q8N5X7 224 aaKnown RBP13.85□□□□□ -0.19
COL17A1-202ENST00000369733 OR4F17Q8NGA8 305 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 ANKRD31Q8N7Z5 1873 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 ACTL6AO96019 429 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 ZNF708P17019 499 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 GLIPR1P48060 266 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 OR5A2Q8NGI9 324 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 P2RX4Q99571 388 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 TRAV14DV4A0A0A6YYC5 116 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 ORM2P19652 201 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 BRS3P32247 399 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 MPLP40238 635 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 PLPPR5Q32ZL2 321 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 PDPNQ86YL7 162 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 TGIF2LXQ8IUE1 241 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 MOB3AQ96BX8 217 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 IL36GQ9NZH8 169 aa13.85□□□□□ -0.19
COL17A1-202ENST00000369733 MSGN1A6NI15 193 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 ZNF343Q6P1L6 599 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 ZBTB34Q8NCN2 500 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 ABHD14BQ96IU4 210 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 CISD1Q9NZ45 108 aaKnown RBP13.84□□□□□ -0.19
COL17A1-202ENST00000369733 J3QT63 122 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 PPOXP50336 477 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 PET117Q6UWS5 81 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 MOB3BQ86TA1 216 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 RNF222A6NCQ9 220 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 TSPAN2O60636 221 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 Q56UQ5 140 aa13.84□□□□□ -0.19
COL17A1-202ENST00000369733 RNF122Q9H9V4 155 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms