RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 A0A1W2PPB8 328 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 A0A1W2PRS3 328 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 KIR3DP1A8MWS1 328 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 GALNSP34059 522 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 CCL20P78556 96 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 HERPUD1Q15011 391 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 BRICD5Q6PL45 260 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 Q6ZN92 141 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 KCNG3Q8TAE7 436 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 SCNM1Q9BWG6 230 aa7.89□□□□□ -1.15
TOP1-201ENST00000361337 SSSCA1O60232 199 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 RFPL3SP0C7P2 107 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 PNLIPP16233 465 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 HOXA6P31267 233 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 WNT5AP41221 380 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 SOX8P57073 446 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 RPS23P62266 143 aaKnown RBP7.88□□□□□ -1.15
TOP1-201ENST00000361337 ZNF92Q03936 586 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 PDCD1Q15116 288 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 DEGS2Q6QHC5 323 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 OR56B2PQ8NGI1 322 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 OR13D1Q8NGV5 346 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 PGAM5Q96HS1 289 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 OR10A2Q9H208 303 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 ZNF442Q9H7R0 627 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 FBLN5Q9UBX5 448 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 CLDN34H7C241 214 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 CELA3AP09093 270 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 LIFP15018 202 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 HOXA5P20719 270 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 C22orf15Q8WYQ4 148 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 CIB3Q96Q77 187 aaPredicted RBP7.88□□□□□ -1.15
TOP1-201ENST00000361337 FAAP24Q9BTP7 215 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 PECRQ9BY49 303 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 RYDENQ9NUL5 291 aaKnown RBP7.88□□□□□ -1.15
TOP1-201ENST00000361337 C1orf123Q9NWV4 160 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 FAM24AA6NFZ4 105 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 TAAR5O14804 337 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 RRP8O43159 456 aaKnown RBP7.88□□□□□ -1.15
TOP1-201ENST00000361337 DANCRP0C864 163 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 CCL2P13500 99 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 B4GALT1P15291 398 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 NUTF2P61970 127 aaKnown RBP7.88□□□□□ -1.15
TOP1-201ENST00000361337 PCOLCEQ15113 449 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 LYZL2Q7Z4W2 148 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 PPP1R32Q7Z5V6 425 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 ATOH7Q8N100 152 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 LGI3Q8N145 548 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 OR52M1Q8NGK5 317 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 LYZL4Q96KX0 146 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 MRPL37Q9BZE1 423 aaKnown RBP7.88□□□□□ -1.15
TOP1-201ENST00000361337 ARV1Q9H2C2 271 aa7.88□□□□□ -1.15
TOP1-201ENST00000361337 PRR33A8MZF0 331 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 KLRC4-KLRK1H3BQV0 150 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 IGHG1P01857 330 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 MSR1P21757 451 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 ACP1P24666 158 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 CD200P41217 278 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HTR5AP47898 357 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 TCTAP57738 103 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H3AP68431 136 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 RUNX1Q01196 453 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 KISS1Q15726 138 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 C20orf196Q8IYI0 205 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 FAM58AQ8N1B3 248 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 ABHD3Q8WU67 409 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 LOXL4Q96JB6 756 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2AAQ96QV6 131 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 TMEM131Q92545 1883 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 IGHV1-45A0A0A0MS14 117 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 A0A1W2PQD3 144 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 FOXI3A8MTJ6 420 aaPredicted RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 KLF7O75840 302 aaPredicted RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 COX6A1P12074 109 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 MEOX1P50221 254 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 DAP3P51398 398 aaKnown RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 FAM3AP98173 230 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 EIF3IQ13347 325 aaKnown RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 EMG1Q92979 244 aaKnown RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 PIGTQ969N2 578 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 TRIB1Q96RU8 372 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 PNRC2Q9NPJ4 139 aaKnown RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 HDGFL3Q9Y3E1 203 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 FIGNL2A6NMB9 653 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2BKO60814 126 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2BJP06899 126 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 FAHP16930 419 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2BOP23527 126 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2BBP33778 126 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 APOBEC1P41238 236 aaKnown RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2BDP58876 126 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2BCP62807 126 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 ZFP36L1Q07352 338 aaKnown RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 CLN3Q13286 438 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST2H2BEQ16778 126 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 ZNF766Q5HY98 468 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.87□□□□□ -1.15
TOP1-201ENST00000361337 OR8G2PQ6IF36 304 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 SSC4DQ8WTU2 575 aa7.87□□□□□ -1.15
TOP1-201ENST00000361337 HIST1H2BHQ93079 126 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms