RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PSG2P11465 335 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 FGF8P55075 233 aaPredicted RBP14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 HIKESHIQ53FT3 197 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 AKR1C8PQ5T2L2 129 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 ZNF429Q86V71 674 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 VSIRQ9H7M9 311 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 NDUFA6P56556 154 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 FGF12P61328 243 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 SPATA46Q5T0L3 261 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 Q6ZRM9 215 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 WDR5BQ86VZ2 330 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 CMTM1Q8IZ96 169 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 SPSB4Q96A44 273 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 YPEL4Q96NS1 127 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 SPIN2AQ99865 258 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 SPIN2BQ9BPZ2 258 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 REPIN1Q9BWE0 567 aaKnown RBP14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 OR1A1Q9P1Q5 309 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 TCFL5Q9UL49 500 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 WSB1Q9Y6I7 421 aa14.83□□□□□ -0.04
PTP4A3-201ENST00000329397 HSPA12AO43301 675 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 PPIHO43447 177 aaKnown RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 CYTIPO60759 359 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 PGLYRP1O75594 196 aaPredicted RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 SCAF4O95104 1147 aaKnown RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 VDAC1P21796 283 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 ID3Q02535 119 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 ZNF674Q2M3X9 581 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 RIPPLY2Q5TAB7 128 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 SLC25A24Q6NUK1 477 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 TIPARPQ7Z3E1 657 aaKnown RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 ZDHHC23Q8IYP9 409 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 ZNF295-AS1Q8N0V1 137 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 RNASE11Q8TAA1 199 aaKnown RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 GPR61Q9BZJ8 451 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 SLC25A31Q9H0C2 315 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 PLSCR2Q9NRY7 297 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 GNG13Q9P2W3 67 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 ZNF391Q9UJN7 358 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 CHTOPQ9Y3Y2 248 aaKnown RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 ZFP92A6NM28 416 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 IFITM10A6NMD0 228 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 TRAPPC2LH3BP13 241 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 DNPH1O43598 174 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 RHBDL1O75783 438 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 UCP1P25874 307 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 RPL23AP62750 156 aaKnown RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 SRPXP78539 464 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 MPV17LQ2QL34 196 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 TMEM105Q8N8V8 129 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 OR1K1Q8NGR3 316 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 PRDM14Q9GZV8 571 aa14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 ERRFI1Q9UJM3 462 aaPredicted RBP14.82□□□□□ -0.04
PTP4A3-201ENST00000329397 NTN3O00634 580 aaPredicted RBP14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 ZNF16P17020 682 aaPredicted RBP14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 CYB561P49447 251 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 GFRA1P56159 465 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 ZFP36L1Q07352 338 aaKnown RBP14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 PCSK4Q6UW60 755 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 GPR146Q96CH1 333 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 KIAA1456Q9P272 454 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 CFAP47Q6ZTR5 3102 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 FOXO1Q12778 655 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 LCN15Q6UWW0 184 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 COLCA1Q6ZS62 124 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 TCTEX1D2Q8WW35 142 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 LRFN1Q9P244 771 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 RNF115Q9Y4L5 304 aa14.81□□□□□ -0.04
PTP4A3-201ENST00000329397 ELOBQ15370 118 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 GFI1BQ5VTD9 330 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 FAM185AQ8N0U4 392 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 MRPL30Q8TCC3 161 aaKnown RBP14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 MEGF10Q96KG7 1140 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 ZNF665Q9H7R5 613 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 ATP23Q9Y6H3 246 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 TUSC2O75896 110 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 CYC1P08574 325 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 METTL15P1P0C7V9 234 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 MDKP21741 143 aaPredicted RBP14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 SPNS3Q6ZMD2 512 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 CLDND2Q8NHS1 167 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 HLA-CQ95604 372 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 PPP1R3CQ9UQK1 317 aa14.8□□□□□ -0.04
PTP4A3-201ENST00000329397 SLC34A2O95436 690 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 IFNA17P01571 189 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 PMELP40967 661 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 RAB11AP62491 216 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 HOXA4Q00056 320 aaPredicted RBP14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 CEACAM21Q3KPI0 293 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 SSX7Q7RTT5 188 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 MKXQ8IYA7 352 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 TRAV24A0A0B4J272 114 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 CNOT4O95628 575 aaKnown RBP14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 F2RP25116 425 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 RAB1AP62820 205 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 ZXDAP98168 799 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 ARL16Q0P5N6 197 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 SAPCD1Q5SSQ6 148 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 CT55Q8WUE5 264 aa14.79□□□□□ -0.04
PTP4A3-201ENST00000329397 PSMF1Q92530 271 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms