RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OR2W1Q9Y3N9 320 aa16.3■□□□□ 0.2
RTN4-201ENST00000317610 PI4KAP42356 2102 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 CNTRLQ7Z7A1 2325 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 TMEM267Q0VDI3 215 aaPredicted RBP16.29■□□□□ 0.2
RTN4-201ENST00000317610 ZNF726P1Q15940 193 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 OR2T2Q6IF00 324 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 ABHD3Q8WU67 409 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 SDF2L1Q9HCN8 221 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 TRBV24-1A0A075B6N3 115 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 TRAPPC2LH3BP13 241 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 CNOT4O95628 575 aaKnown RBP16.29■□□□□ 0.2
RTN4-201ENST00000317610 GPX4P36969 197 aaPredicted RBP16.29■□□□□ 0.2
RTN4-201ENST00000317610 SLC25A24Q6NUK1 477 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 NEK7Q8TDX7 302 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 CABLES2Q9BTV7 478 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 ZNF665Q9H7R5 613 aa16.29■□□□□ 0.2
RTN4-201ENST00000317610 MRPS18CQ9Y3D5 142 aaKnown RBP16.29■□□□□ 0.2
RTN4-201ENST00000317610 OR5H1A6NKK0 313 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 H3BP45 60 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 HSPB6O14558 160 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 SS18L1O75177 396 aaPredicted RBP16.28■□□□□ 0.2
RTN4-201ENST00000317610 WIPI1Q5MNZ9 446 aaPredicted RBP16.28■□□□□ 0.2
RTN4-201ENST00000317610 SLC23A3Q6PIS1 610 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 C20orf204Q6ZNR8 217 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 ZNF525Q8N782 197 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 LSM10Q969L4 123 aaKnown RBP16.28■□□□□ 0.2
RTN4-201ENST00000317610 RSG1Q9BU20 258 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 PLK3Q9H4B4 646 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 PRDM6Q9NQX0 595 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 GFOD1Q9NXC2 390 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 PSG2P11465 335 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 DEFA6Q01524 100 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 Q6ZRM9 215 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 IFI44Q8TCB0 444 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 SCGB1C1Q8TD33 95 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 CLDN23Q96B33 292 aa16.28■□□□□ 0.2
RTN4-201ENST00000317610 ZFP92A6NM28 416 aa16.27■□□□□ 0.2
RTN4-201ENST00000317610 SERPINE2P07093 398 aa16.27■□□□□ 0.2
RTN4-201ENST00000317610 ZNF845Q96IR2 970 aaPredicted RBP16.27■□□□□ 0.2
RTN4-201ENST00000317610 PARD6GQ9BYG4 376 aaPredicted RBP16.27■□□□□ 0.2
RTN4-201ENST00000317610 LINC00470Q9BZP3 86 aa16.27■□□□□ 0.2
RTN4-201ENST00000317610 VSIRQ9H7M9 311 aa16.27■□□□□ 0.2
RTN4-201ENST00000317610 OR14J1Q9UGF5 321 aa16.27■□□□□ 0.2
RTN4-201ENST00000317610 NDUFS6O75380 124 aaKnown RBP16.27■□□□□ 0.19
RTN4-201ENST00000317610 HLA-HP01893 362 aa16.27■□□□□ 0.19
RTN4-201ENST00000317610 COX5BP10606 129 aa16.27■□□□□ 0.19
RTN4-201ENST00000317610 SERF2P84101 59 aa16.27■□□□□ 0.19
RTN4-201ENST00000317610 PMS2P11Q13670 270 aa16.27■□□□□ 0.19
RTN4-201ENST00000317610 LYSMD4Q5XG99 296 aa16.27■□□□□ 0.19
RTN4-201ENST00000317610 MRPL21Q7Z2W9 205 aaKnown RBP16.27■□□□□ 0.19
RTN4-201ENST00000317610 OR5A2Q8NGI9 324 aa16.27■□□□□ 0.19
RTN4-201ENST00000317610 CTDSP1Q9GZU7 261 aa16.27■□□□□ 0.19
RTN4-201ENST00000317610 IGKV3D-15A0A087WSY6 115 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 LRP5LA4QPB2 252 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 NPIPB11E5RHQ5 1161 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 SYNGR2O43760 224 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 IGKV1-39P01597 117 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 OPN1MWP04001 364 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 IGKV1D-39P04432 117 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 OPN1MW2P0DN77 364 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 OPN1MW3P0DN78 364 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 FOLR3P41439 243 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 CXCL12P48061 93 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 ARF1P84077 181 aaKnown RBP16.26■□□□□ 0.19
RTN4-201ENST00000317610 ARL16Q0P5N6 197 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 LRRC75BQ2VPJ9 315 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 SSX7Q7RTT5 188 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 OR51H1Q8NH63 302 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 OR10J5Q8NHC4 309 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 CDH20Q9HBT6 801 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 VAX2Q9UIW0 290 aa16.26■□□□□ 0.19
RTN4-201ENST00000317610 SYNGR1O43759 233 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 CCL4P13236 92 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 GFRA1P56159 465 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 HLA-BQ31612 363 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 LCN15Q6UWW0 184 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 MRGPRGQ86SM5 289 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 HAPLN4Q86UW8 402 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 APOBEC3DQ96AK3 386 aaPredicted RBP16.25■□□□□ 0.19
RTN4-201ENST00000317610 FSCN3Q9NQT6 498 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 TRAV24A0A0B4J272 114 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 IGHV3-9P01782 118 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 MDH2P40926 338 aaKnown RBP16.25■□□□□ 0.19
RTN4-201ENST00000317610 CACNG5Q9UF02 275 aa16.25■□□□□ 0.19
RTN4-201ENST00000317610 ERRFI1Q9UJM3 462 aaPredicted RBP16.25■□□□□ 0.19
RTN4-201ENST00000317610 TRAPPC6AO75865 159 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 IGLV2-14P01704 120 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 IGFBP4P22692 258 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 IZUMO4Q1ZYL8 232 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 PDZD11Q5EBL8 140 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 OR10V1Q8NGI7 309 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 PSMF1Q92530 271 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 DEPPQ9NTK1 212 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 PSENENQ9NZ42 101 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 C5orf49A4QMS7 147 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.24■□□□□ 0.19
RTN4-201ENST00000317610 DEGS1O15121 323 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 MRPL33O75394 65 aaKnown RBP16.24■□□□□ 0.19
RTN4-201ENST00000317610 CCNOP22674 350 aa16.24■□□□□ 0.19
RTN4-201ENST00000317610 TRA2AQ13595 282 aaKnown RBP eCLIP16.24■□□□□ 0.193e-8■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms