RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ID3Q02535 119 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 FAM78BQ5VT40 261 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 OR1F12Q8NHA8 337 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 NABP1Q96AH0 204 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 OR6C1Q96RD1 312 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 FKBP11Q9NYL4 201 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 NAT8Q9UHE5 227 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 FGF5P12034 268 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 GPM6AP51674 278 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 UBE2G2P60604 165 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 EIF3IQ13347 325 aaKnown RBP12.58□□□□□ -0.4
COL6A2-201ENST00000300527 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 OR2V1Q8NHB1 315 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 RAB24Q969Q5 203 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 AKIRIN1Q9H9L7 192 aaPredicted RBP12.58□□□□□ -0.4
COL6A2-201ENST00000300527 CLDN1O95832 211 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 CRYAAP02489 173 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 Q6ZRM9 215 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 ZDHHC23Q8IYP9 409 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 ADPRHL1Q8NDY3 354 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 C11orf1Q9H5F2 150 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 CDH20Q9HBT6 801 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 MSL2Q9HCI7 577 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 CELSR3Q9NYQ7 3312 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 ZNF320A2RRD8 509 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 TGOLN2O43493 480 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 RBMXL2O75526 392 aaKnown RBP12.57□□□□□ -0.4
COL6A2-201ENST00000300527 UCP3P55916 312 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 HYAL1Q12794 435 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 IGFBP7Q16270 282 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 KCNMB1Q16558 191 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 ZNF845Q96IR2 970 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-201ENST00000300527 ADGRG7Q96K78 797 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 TMEM56Q96MV1 263 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 TMEM56-RWDD3S4R434 201 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 MSX1P28360 303 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 S100GP29377 79 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 PTGDSP41222 190 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 CCR5P51681 352 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 IQCJQ1A5X6 159 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 PLPPR1Q8TBJ4 325 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 MRPL30Q8TCC3 161 aaKnown RBP12.57□□□□□ -0.4
COL6A2-201ENST00000300527 FER1L5A0AVI2 2057 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 CACNA1DQ01668 2161 aa12.57□□□□□ -0.4
COL6A2-201ENST00000300527 WDR1O75083 606 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 PGLYRP1O75594 196 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 RPL23P62829 140 aaKnown RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 ZXDAP98168 799 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 HERPUD1Q15011 391 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 SPINK9Q5DT21 86 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 TMEM256Q8N2U0 113 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 OR2T10Q8NGZ9 312 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 FGFBP3Q8TAT2 258 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 PARLQ9H300 379 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 PATZ1Q9HBE1 687 aaKnown RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 GPR27Q9NS67 375 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 GRIFINA4D1Z8 144 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 IGLV3-1P01715 115 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 LBHQ53QV2 105 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 TMEM211Q6ICI0 200 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 TOMM20LQ6UXN7 152 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 MRGPRGQ86SM5 289 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 NFAM1Q8NET5 270 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 ZNF501Q96CX3 271 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 PDGFBP01127 241 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 CST2P09228 141 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 PSMB3P49720 205 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 HNRNPKP61978 463 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 MEF2BQ02080 365 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 HIST3H3Q16695 136 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 YRDCQ86U90 279 aaKnown RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 HLA-CQ95604 372 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 SPACA9Q96E40 222 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-201ENST00000300527 MS4A10Q96PG2 267 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 TBX15Q96SF7 602 aa12.56□□□□□ -0.4
COL6A2-201ENST00000300527 DOCK7Q96N67 2140 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 SYNGR2O43760 224 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 TUSC2O75896 110 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 FUT6P51993 359 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 TMEM41BQ5BJD5 291 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 SCRG1O75711 98 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 GCGP01275 180 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 PFN1P07737 140 aaKnown RBP12.55□□□□□ -0.4
COL6A2-201ENST00000300527 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
COL6A2-201ENST00000300527 CTSSP25774 331 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 TMPRSS7Q7RTY8 843 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 ACTR3CQ9C0K3 210 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-201ENST00000300527 CTDSP1Q9GZU7 261 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
COL6A2-201ENST00000300527 A0A096LPE4 126 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 A0A1W2PPZ6 126 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 PAGE4O60829 102 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 GYPAP02724 150 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 RAB4BP61018 213 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms