RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 AUP1Q9Y679 476 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 RAB29O14966 203 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 CSN3P07498 182 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 EIF4EBP2Q13542 120 aaPredicted RBP15.03■□□□□ -0
SHANK1-201ENST00000293441 LY75O60449 1722 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 VDAC1P21796 283 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 NPAS1Q99742 590 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 TNS1Q9HBL0 1735 aaKnown RBP15.03■□□□□ -0
SHANK1-201ENST00000293441 MBPP02686 304 aaPredicted RBP15.03■□□□□ -0
SHANK1-201ENST00000293441 ASAH2BP0C7U1 165 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 NPY1RP25929 384 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 CD40P25942 277 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 CLLU1Q5K131 121 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 STARD4Q96DR4 205 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 CDRT15L2A8MXV6 281 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 C11orf94C9JXX5 98 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 CLDN34H7C241 214 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 BMPR1BO00238 502 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 TTRP02766 147 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 CEACAM21Q3KPI0 293 aa15.03■□□□□ -0
SHANK1-201ENST00000293441 NUDT16L1Q9BRJ7 211 aaKnown RBP15.03■□□□□ -0
SHANK1-201ENST00000293441 RBFOX3A6NFN3 312 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 CDK2AP1O14519 115 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 CRXO43186 299 aaPredicted RBP15.02■□□□□ -0
SHANK1-201ENST00000293441 ZP3P21754 424 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 EFNB2P52799 333 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 TMEM50BP56557 158 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 MARVELD1Q9BSK0 173 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 FDX2Q6P4F2 183 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 HS3ST3B1Q9Y662 390 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 UNC13CQ8NB66 2214 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 PGA4P0DJD7 388 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 ID1P41134 155 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 BVESQ8NE79 360 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 ZNF519Q8TB69 540 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 PIMREGQ9BSJ6 248 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 SRD5A3Q9H8P0 318 aa15.02■□□□□ -0
SHANK1-201ENST00000293441 PHOX2AO14813 284 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 TFPI2P48307 235 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 ZNF658BQ4V348 819 aaPredicted RBP15.02□□□□□ -0.01
SHANK1-201ENST00000293441 TOMM20LQ6UXN7 152 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 TO15178 435 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 P01737 135 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 C1orf174Q8IYL3 243 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 BRWD1Q9NSI6 2320 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 PTP4A3O75365 173 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 SLC25A42Q86VD7 318 aa15.02□□□□□ -0.01
SHANK1-201ENST00000293441 COX6A1P12074 109 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 ZBTB34Q8NCN2 500 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 DNASE2BQ8WZ79 361 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 CA11O75493 328 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 MMP16P51512 607 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 DXOO77932 396 aaKnown RBP15.01□□□□□ -0.01
SHANK1-201ENST00000293441 NGFRP08138 427 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 COL8A1P27658 744 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 KIR3DL2P43630 455 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 HNRNPA3P51991 378 aaKnown RBP15.01□□□□□ -0.01
SHANK1-201ENST00000293441 ZNF826PQ6ZT77 177 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 TMEM116Q8NCL8 245 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 ZNF552Q9H707 407 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-201ENST00000293441 FOXJ2Q9P0K8 574 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 NPIPB8E9PQR5 432 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 CYB5R3P00387 301 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-201ENST00000293441 CTSBP07858 339 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 KHDC3LQ587J8 217 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 C8orf82Q6P1X6 216 aaPredicted RBP15.01□□□□□ -0.01
SHANK1-201ENST00000293441 ST6GALNAC2Q9UJ37 374 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 PRSS23O95084 383 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 RNFT1Q5M7Z0 435 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 FAM24BQ8N5W8 94 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 RFLNBQ8N5W9 214 aa15.01□□□□□ -0.01
SHANK1-201ENST00000293441 ZCCHC14Q8WYQ9 949 aaKnown RBP15.01□□□□□ -0.01
SHANK1-201ENST00000293441 HAX1O00165 279 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 HIST1H1EP10412 219 aaKnown RBP15□□□□□ -0.01
SHANK1-201ENST00000293441 CEBPDP49716 269 aaPredicted RBP15□□□□□ -0.01
SHANK1-201ENST00000293441 ANKRD55Q3KP44 614 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 WNT2BQ93097 391 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 ZNF426Q9BUY5 554 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 FAM87AP0C7U9 286 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 FAM157CP0CG43 387 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 FAM106CPP0CH98 169 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 RPL7P18124 248 aaKnown RBP15□□□□□ -0.01
SHANK1-201ENST00000293441 EWSR1Q01844 656 aaKnown RBP eCLIP15□□□□□ -0.01
SHANK1-201ENST00000293441 Q9N2K0 584 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 LOC101059948A0A1B0GTJ6 334 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 A0A1W2PPC1 479 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 A0A1W2PQM1 296 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 GAPDHP04406 335 aaKnown RBP15□□□□□ -0.01
SHANK1-201ENST00000293441 PF4V1P10720 104 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 GFRA1P56159 465 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 ABHD14BQ96IU4 210 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 PRSS27Q9BQR3 290 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 HBZP02008 142 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 NANOS3P60323 173 aaKnown RBP15□□□□□ -0.01
SHANK1-201ENST00000293441 FHL5Q5TD97 284 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 GDF15Q99988 308 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 NAT8Q9UHE5 227 aa15□□□□□ -0.01
SHANK1-201ENST00000293441 GUCA2BQ16661 112 aa14.99□□□□□ -0.01
SHANK1-201ENST00000293441 RSPO4Q2I0M5 234 aaPredicted RBP14.99□□□□□ -0.01
SHANK1-201ENST00000293441 TEPPQ6URK8 271 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms