RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 VBP1P61758 197 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 NCS1P62166 190 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 PAX5Q02548 391 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 ARFRP1Q13795 201 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 HLA-DRB5Q30154 266 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 MOGAT2Q3SYC2 334 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 ARSJQ5FYB0 599 aaPredicted RBP5.3□□□□□ -1.56
CD44-204ENST00000279452 MINOS1Q5TGZ0 78 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 GPR107Q5VW38 600 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 DHRS7BQ6IAN0 325 aaPredicted RBP5.3□□□□□ -1.56
CD44-204ENST00000279452 C16orf87Q6PH81 154 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 GDPGP1Q6ZNW5 385 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 TMEM86BQ8N661 226 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 OR4P4Q8NGL7 312 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 OR10R2Q8NGX6 335 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 OR5R1Q8NH85 324 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 OR1L1Q8NH94 360 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 MRPL30Q8TCC3 161 aaKnown RBP5.3□□□□□ -1.56
CD44-204ENST00000279452 CAPSLQ8WWF8 208 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 RPEQ96AT9 228 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 CREB3L1Q96BA8 519 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 MALSU1Q96EH3 234 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 HDHD3Q9BSH5 251 aaPredicted RBP5.3□□□□□ -1.56
CD44-204ENST00000279452 PECRQ9BY49 303 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 MMP28Q9H239 520 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 NCOR1P1Q9H4R4 102 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 OR2S2Q9NQN1 319 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 DPM3Q9P2X0 92 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 VPREB3Q9UKI3 123 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 PSG11Q9UQ72 335 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 MINOS1-NBL1R4GNA1 71 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 ARHGAP32A7KAX9 2087 aa5.3□□□□□ -1.56
CD44-204ENST00000279452 NPIPB11E5RHQ5 1161 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 C15orf65H3BRN8 121 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 BUB1B-PAK6H3BSN5 160 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 J3QR06 171 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 LDLRAD4O15165 306 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 SCGNO76038 276 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 LPLP06858 475 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 CD37P11049 281 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 HIST1H1DP16402 221 aaKnown RBP5.29□□□□□ -1.56
CD44-204ENST00000279452 CD24P25063 80 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 IL3RAP26951 378 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 CD34P28906 385 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 BRS3P32247 399 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 PPP1CCP36873 323 aaKnown RBP5.29□□□□□ -1.56
CD44-204ENST00000279452 REG1BP48304 166 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 RAG2P55895 527 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 GNG2P59768 71 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 MADCAM1Q13477 382 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 HES1Q14469 280 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 GNMTQ14749 295 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 PLAC9Q5JTB6 97 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 UTF1Q5T230 341 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 TPTE2P1Q5T6R2 138 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 OLFML2AQ68BL7 652 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 MOB1BQ7L9L4 216 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 TMEM219Q86XT9 240 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 IZUMO1Q8IYV9 350 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 DYNAPQ8N1N2 210 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 FAM89BQ8N5H3 189 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 OR10A7Q8NGE5 316 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 OR52L2PQ8NGH6 319 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 OR13F1Q8NGS4 319 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 GALMQ96C23 342 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 RIMS4Q9H426 269 aaPredicted RBP5.29□□□□□ -1.56
CD44-204ENST00000279452 PRDM13Q9H4Q3 707 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 RHBDL2Q9NX52 303 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 GFOD1Q9NXC2 390 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 FBLN5Q9UBX5 448 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 SLC23A1Q9UHI7 598 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 HSF4Q9ULV5 492 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 ETV7Q9Y603 341 aa5.29□□□□□ -1.56
CD44-204ENST00000279452 MAP1AP78559 2803 aaPredicted RBP5.29□□□□□ -1.56
CD44-204ENST00000279452 NSD1Q96L73 2696 aaPredicted RBP5.28□□□□□ -1.56
CD44-204ENST00000279452 A0A087X0M5 115 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 A0A1B0GX30 115 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 TRIM64CA6NLI5 447 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 HSD17B6O14756 317 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 SLC31A2O15432 143 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 RGS11O94810 467 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 IGLV1-47P01700 117 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 FCGR3AP08637 254 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 CGB3P0DN86 165 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 CGB7P0DN87 165 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 HKR1P10072 659 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 CFPP27918 469 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 RPS19P39019 145 aaKnown RBP5.28□□□□□ -1.56
CD44-204ENST00000279452 TMEM50BP56557 158 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 HLA-DRB3P79483 266 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 FOXL1Q12952 345 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 ARL6IP1Q15041 203 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 TMEM30BQ3MIR4 351 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 LDLRAD2Q5SZI1 272 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 FAM53AQ6NSI3 398 aaPredicted RBP5.28□□□□□ -1.56
CD44-204ENST00000279452 CCDC144NLQ6NUI1 221 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 C5orf24Q7Z6I8 188 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 MOB3BQ86TA1 216 aa5.28□□□□□ -1.56
CD44-204ENST00000279452 CLVS1Q8IUQ0 354 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms