RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ARID1AO14497 2285 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 K7EM74 188 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 FGF16O43320 207 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 EIF2S3LQ2VIR3 472 aaKnown RBP16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 ZNF718Q3SXZ3 478 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 TMEM268Q5VZI3 342 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 ZNF324BQ6AW86 544 aaPredicted RBP16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 H1FOOQ8IZA3 346 aaPredicted RBP16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 PLPPR1Q8TBJ4 325 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 CXXC4Q9H2H0 198 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 PLEKHA2Q9HB19 425 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 ZC4H2Q9NQZ6 224 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 CCL28Q9NRJ3 127 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 UBE2J1Q9Y385 318 aaPredicted RBP16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 OR2W1Q9Y3N9 320 aa16.69■□□□□ 0.26
PCDHB11-202ENST00000624887 AKAP13Q12802 2813 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 IGHV3-64DA0A0J9YX35 117 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 E5RGE8 158 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 NPIPB11E5RHQ5 1161 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 MBNL2Q5VZF2 373 aaKnown RBP16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 C11orf53Q8IXP5 236 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 CMTM1Q8IZ96 169 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 OR52M1Q8NGK5 317 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 KIRREL1Q96J84 757 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 USB1Q9BQ65 265 aaKnown RBP16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 COQ3Q9NZJ6 369 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 NSG2Q9Y328 171 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 MSRB2Q9Y3D2 182 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 PRR14LQ5THK1 2151 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 HSD17B6O14756 317 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 TIMM8AO60220 97 aaPredicted RBP16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 EIF5AP63241 154 aaKnown RBP16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 FIP1L1Q6UN15 594 aaKnown RBP16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 TMED6Q8WW62 240 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 TLNRD1Q9H1K6 362 aa16.68■□□□□ 0.26
PCDHB11-202ENST00000624887 C1QTNF9BB2RNN3 333 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 TOR1AO14656 332 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 CDS2O95674 445 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 GCH1P30793 250 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 FABP6P51161 128 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 ZNF273Q14593 569 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 C1orf185Q5T7R7 199 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 Q6ZR03 302 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 OR4D5Q8NGN0 318 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 RNF141Q8WVD5 230 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 OR2S2Q9NQN1 319 aa16.67■□□□□ 0.26
PCDHB11-202ENST00000624887 LGALS8O00214 317 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 UCP1P25874 307 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 TIMP3P35625 211 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 TUSC1Q2TAM9 212 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 RPL7L1Q6DKI1 246 aaKnown RBP16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 ZNF695Q8IW36 515 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 MBNL3Q9NUK0 354 aaKnown RBP16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 TRAPPC2LQ9UL33 140 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 WIPI2Q9Y4P8 454 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 DUXBA0A1W2PPF3 345 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 ST8SIA3O43173 380 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 HAND1O96004 215 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 ZNF474Q6S9Z5 364 aaPredicted RBP16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 SELENOHQ8IZQ5 122 aaKnown RBP16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 RPRMLQ8N4K4 120 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 TAS2R3Q9NYW6 316 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 TAAR3PQ9P1P4 343 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 ERRFI1Q9UJM3 462 aaPredicted RBP16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 FZR1Q9UM11 496 aa16.66■□□□□ 0.26
PCDHB11-202ENST00000624887 A0A1B0GWJ7 208 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 TSPAN4O14817 238 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 PGLYRP1O75594 196 aaPredicted RBP16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 GAPDHP04406 335 aaKnown RBP16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 LMO1P25800 156 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 TMEM33P57088 247 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 KRTCAP3Q53RY4 240 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 TIMM23BQ5SRD1 257 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 ZNF826PQ6ZT77 177 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 SPACA3Q8IXA5 215 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 LILRB1Q8NHL6 650 aaPredicted RBP16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 IL1F10Q8WWZ1 152 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 GPHA2Q96T91 129 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 TAF9BQ9HBM6 251 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 FBXL17Q9UF56 701 aa16.65■□□□□ 0.26
PCDHB11-202ENST00000624887 NKX2-6A6NCS4 301 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 H0Y980 276 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 FAM157CP0CG43 387 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 S100GP29377 79 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 SPIN2AQ99865 258 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 SPIN2BQ9BPZ2 258 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 PIGMQ9H3S5 423 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 MSL2Q9HCI7 577 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 LUZP4Q9P127 313 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 OR1A1Q9P1Q5 309 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 POMT1Q9Y6A1 747 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 DSPP15924 2871 aaKnown RBP16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 TRAV39A0A0B4J263 110 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 ATP6V1G2-DDX39BF2Z307 99 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 NDUFA2O43678 99 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 P2RY1P47900 373 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 GPR157Q5UAW9 335 aa16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 EIF5AL1Q6IS14 154 aaKnown RBP16.64■□□□□ 0.25
PCDHB11-202ENST00000624887 WDR82Q6UXN9 313 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms