RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	FCN1	O00602	326 aa		13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	VDAC1	P21796	283 aa		13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	MEF2B	Q02080	365 aa	Predicted RBP	13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	TCF23	Q7RTU1	214 aa		13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	OR10S1	Q8NGN2	331 aa		13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	PP6455	Q8WZ26	134 aa		13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	BORCS7	Q96B45	105 aa		13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	STARD4	Q96DR4	205 aa		13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.58	□□□□□ -0.24
SYNRG-223	ENST00000616179	WDR87	Q6ZQQ6	2873 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	TRAV39	A0A0B4J263	110 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	TRBV11-1	A0A0K0K1C0	115 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	C5orf63	A6NC05	138 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	PROB1	E7EW31	1015 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179		F6UZH7	168 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	MGST1	P10620	155 aa	Known RBP	13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	ZNF596	Q8TC21	504 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	FASLG	P48023	281 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	RAN	P62826	216 aa	Known RBP	13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	RCC1L	Q96I51	464 aa	Known RBP	13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	KCNK17	Q96T54	332 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	PARL	Q9H300	379 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	ALKBH4	Q9NXW9	302 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	TMEM196	Q5HYL7	178 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	DENND4C	Q5VZ89	1909 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	ASXL3	Q9C0F0	2248 aa		13.57	□□□□□ -0.24
SYNRG-223	ENST00000616179	SEMA4F	O95754	770 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	SLC35B1	P78383	322 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	MMD	Q15546	238 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	C22orf15	Q8WYQ4	148 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	RNF150	Q9ULK6	438 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	XIRP2	A4UGR9	3374 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	FFAR4	Q5NUL3	377 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	OR10G4	Q8NGN3	311 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	OR10G9	Q8NGN4	311 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	OR10G7	Q8NGN6	311 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	CA11	O75493	328 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	CXCL10	P02778	98 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	OR5G3	P0C626	314 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	IL15RA	Q13261	267 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	OR10V1	Q8NGI7	309 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	POC1B	Q8TC44	478 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	PSMF1	Q92530	271 aa		13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	RPP25	Q9BUL9	199 aa	Known RBP	13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	CISD1	Q9NZ45	108 aa	Known RBP	13.56	□□□□□ -0.24
SYNRG-223	ENST00000616179	SLC38A11	Q08AI6	406 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	LEMD1	Q68G75	181 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	APH1A	Q96BI3	265 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179		A8MXE2	369 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	SIRPB1	O00241	398 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	LYPD6B	Q8NI32	183 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	TMEM222	Q9H0R3	208 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	TRBV24-1	A0A075B6N3	115 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	DIRC3	C9JPN6	131 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	C11orf94	C9JXX5	98 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	SHB	Q15464	509 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	MSMO1	Q15800	293 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	PRSS8	Q16651	343 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	HLA-B	Q31612	363 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	C9orf40	Q8IXQ3	194 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	HINT2	Q9BX68	163 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	LPAR2	Q9HBW0	351 aa		13.55	□□□□□ -0.24
SYNRG-223	ENST00000616179	BCAT2	O15382	392 aa	Predicted RBP	13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	KRAS	P01116	189 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	SPPL3	Q8TCT6	385 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	NEIL1	Q96FI4	390 aa	Predicted RBP	13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	DEFB126	Q9BYW3	111 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	ASCL3	Q9NQ33	180 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	KIAA1644	Q3SXP7	199 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	IGHV5-51	A0A0C4DH38	117 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	SYNGR2	O43760	224 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	SCT	P09683	121 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	IER3	P46695	156 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	GATAD1	Q8WUU5	269 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	NAT8B	Q9UHF3	227 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	BLACE	A4D250	179 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	PDCD6	O75340	191 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	CA3	P07451	260 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	CBLN1	P23435	193 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	MPL	P40238	635 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	TCL1A	P56279	114 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	EDDM3B	P56851	147 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	RPL23	P62829	140 aa	Known RBP	13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	FAM90A2P	Q658T7	463 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	MKX	Q8IYA7	352 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	OR2V1	Q8NHB1	315 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	R3HDM4	Q96D70	268 aa		13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	MSI2	Q96DH6	328 aa	Known RBP	13.54	□□□□□ -0.24
SYNRG-223	ENST00000616179	PGPEP1L	A6NFU8	196 aa		13.53	□□□□□ -0.24
SYNRG-223	ENST00000616179	DEFA4	P12838	97 aa		13.53	□□□□□ -0.24
SYNRG-223	ENST00000616179	EIF3I	Q13347	325 aa	Known RBP	13.53	□□□□□ -0.24
SYNRG-223	ENST00000616179	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.53	□□□□□ -0.24
SYNRG-223	ENST00000616179	C1orf194	Q5T5A4	169 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms