RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LIME1Q9H400 295 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 PCDHB10Q9UN67 800 aa14.77□□□□□ -0.04
SHKBP1-224ENST00000600718 TMEM178BH3BS89 294 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 TSC22D2O75157 780 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 PGAM2P15259 253 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 UBE2MP61081 183 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 AESQ08117 197 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 ZNF561Q8N587 486 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 OR52B4Q8NGK2 314 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 SDSLQ96GA7 329 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 COQ2Q96H96 371 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 CBLN4Q9NTU7 201 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 TMEM106BQ9NUM4 274 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 KCNIP1Q9NZI2 227 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 LGALS8O00214 317 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 MGST3O14880 152 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 KRBOX4Q5JUW0 171 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 ADAD2Q8NCV1 583 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 OR5D13Q8NGL4 314 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 RTBDNQ9BSG5 229 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 TMPRSS13Q9BYE2 586 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 C5orf66Q9H5L9 145 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 KIF25Q9UIL4 384 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 IGSF10Q6WRI0 2623 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 PLCE1Q9P212 2302 aa14.76□□□□□ -0.05
SHKBP1-224ENST00000600718 TRAV38-1A0A0B4J264 116 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 K7N7A8 449 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 BET1O15155 118 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 DIRAS3O95661 229 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 SULT1A3P0DMM9 295 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 SULT1A4P0DMN0 295 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 UCP3P55916 312 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 HERPUD1Q15011 391 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 C5orf24Q7Z6I8 188 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 MUC20Q8N307 709 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 DEFB108BQ8NET1 73 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 CCL17Q92583 94 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 MOB3AQ96BX8 217 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 VRK1Q99986 396 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 CABLES2Q9BTV7 478 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 ZNF665Q9H7R5 613 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 DCAF16Q9NXF7 216 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 C14orf166Q9Y224 244 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 HIVEP3Q5T1R4 2406 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 KALRNO60229 2985 aa14.75□□□□□ -0.05
SHKBP1-224ENST00000600718 PPIAL4EA0A075B759 164 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 MEIKINA0A087WXM9 373 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 IGKV1-6A0A0C4DH72 117 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 IGHV1-69-2A0A0G2JMI3 117 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 PPIAL4DF5H284 164 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 ZNF205O95201 554 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 PPIAL4FP0DN26 164 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 ANXA3P12429 323 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 AKR1C4P17516 323 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 NFYAP23511 347 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 ZBTB25P24278 435 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 DHODHQ02127 395 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 HMGN3Q15651 99 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 TMEM128Q5BJH2 165 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 LYG2Q86SG7 212 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 OR8H3Q8N146 312 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 OR11H7Q8NGC8 314 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 HEXA-AS1Q9H8Q6 139 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 PPIAL4AQ9Y536 164 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 MAB21L2Q9Y586 359 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 TRBV6-7A0A0A0MS04 114 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 TRAV39A0A0B4J263 110 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 CTSDP07339 412 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 ZNF728P0DKX0 622 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 AADACP22760 399 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 GLIPR1P48060 266 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 HERV-K104P61576 105 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 BAMBIQ13145 260 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 DHRS2Q13268 280 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 CLLU1Q5K131 121 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 ZNF788Q6ZQV5 615 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 ZNRF1Q8ND25 227 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 OR10J5Q8NHC4 309 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 FAM234AQ9H0X4 552 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 NCOR1P1Q9H4R4 102 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 TAF9BQ9HBM6 251 aa14.74□□□□□ -0.05
SHKBP1-224ENST00000600718 C9orf170A2RU37 121 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 NPIPB11E5RHQ5 1161 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 TUSC2O75896 110 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 GOSR1O95249 250 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 PPYP01298 95 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 GYPAP02724 150 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 PPP1R1AQ13522 171 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 C11orf71Q6IPW1 123 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 TRAT1Q6PIZ9 186 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 MEX3BQ6ZN04 569 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 SPICQ8N5J4 248 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 LURAP1Q96LR2 239 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 FXYD6Q9H0Q3 95 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 RAB1BQ9H0U4 201 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 DNTTIP1Q9H147 329 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 A6NNC1 897 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 IFNA7P01567 189 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 CD8AP01732 235 aa14.73□□□□□ -0.05
SHKBP1-224ENST00000600718 HLA-AP01891 365 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms